Ostreococcus lucimarinus: OSTLU_38436
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Entry
OSTLU_38436 CDS
T01029
Symbol
CHR3509
Name
(RefSeq) predicted protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_38436 (CHR3509)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
OSTLU_38436 (CHR3509)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
5001704
NCBI-ProteinID:
XP_001417965
JGI:
38436
UniProt:
A4RXA5
LinkDB
All DBs
Position
5:complement(246952..248781)
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AA seq
609 aa
AA seq
DB search
MSKRLRNTLKEAAHAENGRLPVFSVDNVVEATGGMDSGTFSVNLKPYQMVGVNFLMLLQQ
NAIPGAILADEMGLGKTAQAIAFIATSRYHPDTGALAENGVRWPRVVSKPNPVLVVSPAS
LLENWKRELGMWAPNMRVGVFHGESRADVRQTEEYHRERTGECCYDVIIVCYSLFERDSI
ESQDNRSWLQRMEFSHLILDEAHLLKNRDAQRTIRLTRTARKAHYRLLLTGTPLQNNLRE
LEALIEFVLPGLLKHGELGEGLEEDDQSERRVKKVRRILEPFVLRRLKETVAKQLAPKVQ
VKDVIAMSGRQAEAYKLAVDRIRREALEGKARSANGIGLAQSRLKAIFVHLRKVANHPLL
VRNEYTDEDLIEIADICHKKRVFGPDARLERVKEHVSGLSDFGLHQLCGDYMLDGALKDK
MLDPEIGLQSAKVQRLQELLVELKAKGSRPLIFSQWKIMLDILEWVLHHMGWKYARLDGD
TAVDNRQELVDRFNAKDSYLDTFILSTRAGGQGLNLTGADTVILHDCDFNPQIDRQAEDR
CHRLGQTKTVTVYRLVTEGSVDEKIVAIAEQKLNLGSTILAEGDQAKPDAKDETRAMQAI
IEELVASGD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggttgcgaaatacgctgaaggaagcggcgcacgctgagaatggtcgattg
ccagtgttttcagttgacaacgtcgtcgaggcgacgggaggtatggacagcggaacgttt
tcggtcaatcttaaaccgtatcaaatggtcggcgtaaactttctcatgcttttacagcaa
aacgcgattccaggcgctatcttggcagacgaaatgggtcttggaaagaccgcccaagcg
attgcgttcatagcgacgagtcgatatcacccagacactggcgcgcttgccgagaacggc
gtgcgttggccgcgcgtggtctccaagccaaatcccgtcctcgtagtctctccggcgagt
cttctggaaaactggaagcgtgaactcggcatgtgggccccaaatatgcgcgttggtgtg
tttcacggcgaaagtcgcgcagacgtccgacaaacggaagaatatcatcgagagcgaacc
ggcgaatgctgctacgacgtcatcattgtttgctattctttattcgaacgtgactctatc
gagtcgcaagataatcgttcgtggttacaacgcatggagttttctcacttaatcctagac
gaggcgcacttgctaaagaacagagacgcgcagagaacaataaggttgacaagaacggcg
cgcaaggcgcactatcgtctcctgctcaccggaactcctcttcaaaacaaccttcgcgaa
ctcgaggcgttgattgaattcgtgttaccaggcttactgaaacacggcgaacttggcgag
ggcctcgaagaagacgaccaatccgaacgtagggtcaagaaagtgcgacgcattctggaa
cctttcgtgctcagacgcctcaaagaaactgtcgcgaagcaattggcgccgaaggtgcaa
gtgaaggatgtcatcgcgatgagcggaagacaagctgaggcatataagctcgccgtcgat
cgaattcgtcgtgaggcgttagaaggcaaggcgcgaagtgcgaatggcatcggtttggcc
cagtcaaggttgaaagcaattttcgtgcatttacgcaaggttgcgaatcatcctttactc
gtgcgaaacgaatacaccgacgaggacttgattgaaatcgccgacatctgtcacaaaaaa
cgagttttcggccccgacgctcgactcgagcgcgtcaaggagcacgtgagcggcttgagc
gatttcggtttacatcagctctgcggcgattacatgcttgacggcgcgcttaaggacaag
atgctggaccccgagatcggtttgcagagcgctaaggtgcaacgcttgcaggaacttctc
gtcgagttgaaggcgaaaggctctcgcccgctgatattttctcagtggaaaatcatgctc
gacatcctagagtgggtccttcatcacatgggttggaaatacgcccgacttgacggagac
accgcggtggataacagacaagagttggtcgacagattcaacgccaaggattcatacctc
gacactttcatcctatccacgcgcgccggcggccaaggcttaaacctcaccggcgccgac
accgtcatcttgcacgactgcgacttcaacccacagatagatcgtcaagccgaagaccgt
tgccaccgtctcggccaaacgaagacagtcaccgtctaccgtctcgtcaccgaaggcagc
gtcgatgaaaaaatcgtcgccatcgccgagcaaaagctgaacctcggcagcacgattctc
gccgagggcgatcaagccaagcccgacgccaaggacgagacgcgcgcgatgcaagccatc
atagaagagttggtcgcgtccggtgattga
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