Ostreococcus lucimarinus: OSTLU_38526
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Entry
OSTLU_38526 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_38526
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OSTLU_38526
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
Helicases
OSTLU_38526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
DHX37_C
AAA_19
AAA_23
ATPase
nSTAND3
Coatomer_b_Cpla
Motif
Other DBs
NCBI-GeneID:
5001719
NCBI-ProteinID:
XP_001417825
JGI:
38526
UniProt:
A4RXW8
LinkDB
All DBs
Position
5:join(628124..628594,628805..631088,631128..631834)
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AA seq
1153 aa
AA seq
DB search
MGRSNGDGASDASAALVFLPKRKGTSGRDGASAIEARDRRRAEAHAARRVTKLSNSQKRK
LKKLAEEERKRSERASVMAMLEANVADERALGLMRATTSLGARETAKEKMRRALKAERAG
VTLDDLDDARLTKRPKAVGREDEEQSEDESESEREAAPKSNEYKGLHHEVFRGCSFVVPV
QRTGKINDSREGLPIVQEEHEIVDAINTNPVTVICGATGCGKTTQVPQFLYEAGYGDPDC
DSHPGAVAVTQPRRVAVTSTARRVAEELNVPLGGDVGYQVRYDKNVGDNPRIKFMTDGIL
LREVQADFLLRKYSVVIIDEAHERSVNTDILLGLLSRIVPLRAALAAEGKAVTPLRLVVM
SATLRVEEFVENRKLCPTPPALLQVATRQFPVTVHFSRKTEHADYVGAATKKVLAIHRKL
PPGGILVFLTGQREVEMVCRKLRDAYPLHGKRVNAAESSDDEDEDSGDAMDDTYDVDAID
AGGEDLGGDDDEPDFDGEDDMSDAASDISEEDEVLVMGGEGVGEEEAAEAEAAWTRANAP
STGLGADKTADGPGGLNVLPLYALLPPNLQQRVFQASPDGSRMVIVATNVAETSLTIPGI
RYVVDAGRAKERVYERDASLSRFQVGWVSKASADQRAGRAGRTSPGHCYRLFSSAHFVDE
MKAHADPQILGVPVEGVVLQMRAMGIDKVVNFPFISPPERSALAAAEKTLQILGAVEKSR
HGEEIGPLTDLGRAMAVLPISPRHSRMLFAAAQSGVGGCLSPAIAIAAALSLDSPFLRNS
SETVEDDEEEGEAKATPKGPPPHVRFHHPASDALSAAQALLAYDACKSSDAVTFCSTNRL
HEKTMREMSDLRRQLKRLVVNLATTSKFGDDVFPNAAVLNELDDSNQAASSMISLPPGGD
VERTLRQALCAGWADRIAPNEKSTKATRYVPALLDAAVFLHPTSSLHRSSPDYVVYTDLL
QTDKRAYIVGATGIEPEWLIQHCDALVDQGAMLADPAPRYVSREDRVVGWTAPRFGPHRW
DLPLNPIAVNDVDTKCAVFATALLSGAVSPPMADLREKLAAKPLLASRPEGRAQKRVVDL
LGALKRVGGGICTRAQLRQIWMTRGNDRYLYPELKAWMRAGKGYALEQAWLKIVQGVVNY
DEGKERKKKKGKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggacgctcgaacggcgacggcgcgtcggacgcgagcgccgcgctcgtgttcctgccc
aagcgcaagggcacgagcgggcgggacggcgcgagcgcgatcgaggcgcgcgatcggcga
cgcgccgaggcgcacgccgcgcgcagggtgaccaagctgagcaattcgcaaaagcgcaaa
ctgaagaaactggctgaggaggagcggaaacgaagcgaaagggcgagcgtgatggccatg
ctggaggcaaacgtggcggatgaacgcgcgctggggctgatgcgggcgacgacgtcgttg
ggggcgagagagacggcgaaggagaagatgcggcgcgcgctcaaggcggaacgcgcgggg
gtgacgctggacgacttggacgacgcgcggttgacgaagcgaccgaaggctgtgggaaga
gaagatgaagaacagagcgaggacgagagcgagagcgaacgggaagcggcgccgaaatcg
aacgagtacaaaggcttgcatcacgaagtgtttcgaggatgttcctttgtcgttcccgtt
caacggaccgggaagattaacgattcgcgcgaggggcttccgatcgttcaagaggaacat
gaaatcgtagacgcgattaataccaatcccgtgaccgtcatctgtggcgccacgggttgc
ggtaagacgacgcaagtgccgcagttcttgtacgaggctggttacggcgatccggattgc
gacagtcaccctggggcggtggcggtgacacagcctcgacgtgtggcggtgacctccacg
gcgcgtcgtgtggcagaagagctgaacgttcctctcggtggtgatgtcggatatcaagtg
cgttacgacaagaacgtcggcgacaacccgcgtatcaaatttatgacggatggcatcttg
cttcgagaagtacaggcagacttccttttacgcaaatattcggtggtgatcatcgatgaa
gcgcacgaacggagcgtaaatacggatattctgttgggtcttctctcacgaatcgttcct
cttcgagccgcactcgcggctgaagggaaagctgtgacgccgcttcgattggtcgtgatg
tccgcgacgttgcgagtcgaagagttcgtggagaacaggaagctatgtccgacacctcca
gcgttgcttcaagtcgccacgcgtcagtttccagtcactgtgcacttttcacggaaaacg
gaacacgctgattacgtcggtgcggcgacgaagaaggtactcgcgatccatcgcaagctt
ccacctggcggcattctcgtctttctgactggtcagcgagaggtggagatggtctgtcgc
aagcttcgagacgcgtacccgcttcacgggaagcgcgtcaacgcggcggaaagttcggat
gatgaagatgaagatagcggcgacgcgatggatgacacatacgacgtcgacgcgatcgac
gcggggggggaagatttgggcggcgacgacgacgaacccgatttcgacggcgaggacgat
atgtcggacgccgcgagcgacatcagcgaagaggacgaagtcctagtcatgggtggtgag
ggcgttggagaagaagaagccgcagaagccgaagcagcttggactcgagcgaatgctcca
tctacgggtttgggcgccgataagacggcggacggaccgggaggtttaaatgtgcttccg
ctctacgcgctactgcccccgaatttgcagcagcgcgtgtttcaagcttcacccgacggc
tctagaatggtcatcgtcgctacaaacgtcgcggaaacatctttgacgattccagggata
cggtacgtcgtcgacgccgggagagcaaaggagcgggtgtacgagcgagacgcaagtttg
tcgcggtttcaagtcggatgggtgagcaaggctagcgccgatcaacgcgccgggcgggcc
gggcgtacgagtccagggcactgttatcgtctgtttagtagcgcacacttcgtggatgag
atgaaagcgcacgcagatccacaaatcctgggtgtacccgtcgaaggcgtcgtgttgcaa
atgcgtgccatgggcatcgacaaagtggtcaactttccttttatttcgcctcccgaaaga
tcggctctcgcggcagcggagaagactttacagattctcggagcggtagagaagagtagg
catggcgaagagatcgggcctttgaccgatttagggcgcgctatggcggttttgccaatc
agtccacggcactcgagaatgttgttcgccgccgctcaaagcggcgtgggaggttgcctc
tcaccggcgattgccatcgctgccgcgttgagcctcgacagcccattcctgcgaaatagc
agcgaaactgtggaagacgacgaagaagaaggagaggcgaaggcgacacccaaaggtccg
ccaccgcacgttcgatttcaccacccggcgagcgacgctctctcggcggcgcaggcgctc
ttggcgtacgacgcctgcaagagctcggacgcggtgacgttttgctctacgaataggttg
cacgaaaagaccatgcgagaaatgtccgatttgcggcgacaattgaaacggctcgtcgtc
aatctcgcgacgacatccaagtttggcgacgacgtctttcccaacgccgcagtgctgaac
gaactcgacgattcaaaccaggctgcttcgtcgatgatttcgcttcctcccgggggcgat
gtcgagcgcacgttgagacaggcgctgtgtgcgggttgggcggatagaattgccccgaac
gagaaatcgaccaaggcgacgcgatacgttccggcgctcctcgacgccgcggtgtttctt
catccaacgtcttcgttgcatcgaagctctccggattacgtcgtctacaccgacttacta
caaacggacaagcgcgcctacatcgtcggcgccaccgggattgagcccgagtggttgatt
cagcactgcgacgcactcgtggatcaaggcgctatgctcgccgacccggcgccgagatac
gtctcgcgggaggaccgcgtcgtcggttggacggcgccgagattcggaccgcaccgctgg
gatttgccgctgaatccaattgctgttaatgatgtggataccaaatgcgccgtcttcgcc
accgcgcttttgtcgggggcggtgtcgccacctatggcggatttgcgagagaagctcgcc
gccaagccgctcttggcgtctcgacctgagggacgagctcaaaagcgcgtcgtcgattta
ctcggcgcactgaaacgtgtcggtggtggcatttgtactcgggcacaattacgacaaatc
tggatgactcgtgggaacgaccggtacttgtacccagagctcaaggcgtggatgcgggcg
ggcaaaggttacgcgctcgaacaggcgtggttaaaaatagttcagggcgtcgtgaattac
gacgaaggcaaggagcgaaagaagaagaagggaaagaagtga
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integrated database retrieval system
