Ostreococcus lucimarinus: OSTLU_38697
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Entry
OSTLU_38697 CDS
T01029
Name
(RefSeq) predicted protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_38697
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OSTLU_38697
Spliceosome [BR:
olu03041
]
Complex C
Other components
Complex C specific factors
OSTLU_38697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
ABC_tran
ResIII
nSTAND3
AAA_7
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
5001996
NCBI-ProteinID:
XP_001417841
JGI:
38697
UniProt:
A4RXZ6
LinkDB
All DBs
Position
5:674673..676814
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AA seq
713 aa
AA seq
DB search
MAGFWRPGADAPSTSAPSTLLTLDVDADADATGTLIQFEKNPKASLSARRRALPIAAHAD
ELMYCVEKHQTTVIVGHTGCGKTTQIPQYLRDGGWCGGGATVAVTQPRRVAAQTVAQRVA
EEVGCVIGDTVGYAIRFEDVCTPGKTEIKFCTDGALLRELAEDPLLTKYSVVIVDEAHER
TLATDVLLGLLKKVQRARRDLRLIVSSATIQAESFAAFFDASGEDDDGDGPSRKPIIMSV
EGRAHGVLIHYLDEPTGDYVLSAVETALEVHRNEGPGDILIFLTGEGEIDDAVNLLEEEA
REMKRDPRRSHDALDLVVCPLYAGLNPAAQLEAFRPPRRGARKVVVATNVAETSVTIEGV
VYVIDSCFAKQKAFDPERGMESLFVAPASKASTNQRAGRAGRVRPGKCFRLCTEIDYRSL
ADVTAPEIVRSDLASTVLQIKAMGIDNIMNFEWVSPPPAANMIKALELLYALRALDDDAK
LTSPLGVHLAEIPLEPQLGKMLLVSGEMGCVREALTVAAYMQVQSLWVTHRGQKKRLDEM
RDRFAVEEGDAVMMLNIHDAYCDARNQAKFASNNMLNHRALLRAGDVRSQLKKHLARLGV
VTNSSCGDDTVPIRRAIAAGFFANAATLAPYGGGPDGSVFHSLRAMSARARARELRIHPS
SALFRSRPQCVAYCSAVRTDREYMRDVTVVEADWLRELAPHFYRAVSANPTTQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccgggttctggcgcccaggcgcggacgctccctcgacgtccgcgccgtcgactctc
ttaactctcgacgtcgacgccgatgccgacgccacggggacgttgattcaattcgagaaa
aatccgaaagcgtcgctgagcgcgcgtcgtcgcgcgctcccgatcgcggcgcacgcggac
gaattgatgtactgcgtcgagaaacatcaaaccacggtcatcgtcgggcacacggggtgc
ggaaagacgacgcagataccgcagtacctgcgagacggcggctggtgcggcggcggcgcg
actgtggcggtgacgcagccgagacgagtggcggcgcagacggtggcgcaacgcgtcgca
gaggaggtagggtgtgtgataggggatacagttgggtacgcgatacgatttgaggacgtg
tgcacgccggggaagacggagattaaattttgcacggatggagcgctgttgcgcgagctc
gcggaggatccgttgttgacaaagtattcggtggtgatagtggacgaggcgcacgagcgc
acgttagcgacggacgtgttgttaggattattgaagaaagtgcagcgcgcgagaagggat
ttgcggttgatcgtgtcgagcgcgacgattcaggcggaatcattcgcggcgttctttgac
gcgagcggcgaggacgacgacggcgatggaccttcgagaaagcccatcatcatgtccgtc
gaaggtcgagcgcacggtgtgttgattcattatctggatgaaccgaccggagattacgtg
ttgagcgcggtagagacggcgttggaagtgcatcgaaacgaaggaccaggtgatatatta
atctttctcacaggcgagggcgagatcgacgacgccgtcaacttgctcgaagaggaagcg
cgagagatgaaacgcgatccgagacggtcacacgatgcgctggatttagtggtttgtcca
ctgtatgcgggattaaatcctgcggcgcagttggaggcgtttcgaccgccgcgcagaggc
gcgcgcaaagtcgtcgtggcgacaaacgttgccgaaacgtctgtgacgattgaaggtgtc
gtgtacgtcatagattcatgctttgcgaagcaaaaggcgttcgacccagagcgcggcatg
gagagtttgttcgtcgcacccgcgagcaaggcgagtacgaaccaacgcgccggtcgcgcc
ggtcgcgtgcgtccgggtaaatgctttcgcttgtgcaccgagattgactatcgctcgttg
gccgacgtcacggctccggagatcgttcgaagtgacctcgcgagtacggttttgcagatc
aaggcgatgggtattgataatatcatgaactttgagtgggtgtcgccgccgcccgcggcg
aacatgatcaaggcgctcgagcttttatacgcgctcagggctttggacgacgacgccaag
ctcacgagtccgctcggcgtgcacttagccgaaatcccactcgagccgcagctagggaag
atgctcctcgtgagtggagagatgggatgcgtaagggaagcgttgactgtcgcggcgtac
atgcaagtgcagtcgttgtgggtcacgcatcgcgggcaaaagaaacgcttagatgagatg
cgcgaccgctttgccgtggaagaaggagacgcagtgatgatgttgaacatccacgacgcg
tactgtgacgcgagaaaccaggcaaagtttgcgagcaacaacatgctcaatcatcgagcg
ctgcttcgggctggagatgtacgcagtcaattgaaaaagcatctcgctagactgggagtc
gtcacgaattcgtcttgcggcgatgatacggtaccaattcgacgtgcgattgctgctggg
ttctttgctaacgctgcaacgctcgcgccctacggtggcggccccgatggttccgtcttt
cattctctccgcgcgatgagtgcgcgcgcgcgtgctcgagagctccgaatacatccaagc
tccgcgctgttccgctcgcgaccgcaatgcgtggcgtattgctccgccgttcgcacagat
cgcgagtacatgcgcgacgtcaccgtcgtcgaagccgattggttgcgcgagctcgcgccg
cacttctatcgcgcggtgagcgccaatccgacgacgcaatag
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