Ostreococcus lucimarinus: OSTLU_39197
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Entry
OSTLU_39197 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10755
replication factor C subunit 2/4
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03030
DNA replication
olu03410
Base excision repair
olu03420
Nucleotide excision repair
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSTLU_39197
03410 Base excision repair
OSTLU_39197
03420 Nucleotide excision repair
OSTLU_39197
03430 Mismatch repair
OSTLU_39197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
olu03032
]
OSTLU_39197
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_39197
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_39197
DNA replication proteins [BR:
olu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OSTLU_39197
DNA Replication Termination Factors
ELG1-RFC complex
OSTLU_39197
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
OSTLU_39197
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OSTLU_39197
Check point factors
HRAD17(Rad24)-RFC complex
OSTLU_39197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
RuvB_N
AAA_14
Viral_helicase1
DNAX_ATPase_lid
AAA_5
AAA_22
AAA_assoc_2
AAA_16
DEAD
Mg_chelatase
RNA_helicase
nSTAND3
ABC_tran
AAA_18
AAA_30
AAA_33
AAA_28
AAA_11
AAA_7
AAA_3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
5004700
NCBI-ProteinID:
XP_001420841
JGI:
39197
UniProt:
A4S5W4
LinkDB
All DBs
Position
12:complement(404188..405192)
Genome browser
AA seq
334 aa
AA seq
DB search
MPWVEKYRPKTLDDLVGNDDAVDRMRTMVRSGFMPNLIFSGPPGCGKTSAIGVLARELLG
DKYKEAVLEMNASDERGIDVVRNKIKMFAQKKVTLAPGRTKLVILDEADSMTTAAQQAMR
RTMEIYSATTRFALACNTSEKVIEPIQSRCAIVRFGKLTDAQVLKRLMTVVEAEKVTYVP
KGLEAIVFTADGDMRQALNNLQSTALGFGMVNEENVFRVCDQPHPNIVRDAFSFILQGNV
DDAYARLKSLHDQGYSVFDIIGTMYRVCKNFDDTAMPEFIKLELIRIIGFTHLRLSEGCA
TMIQIGGGVARMVELVSDAKKMGGYSAELGLDAL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgggtcgagaagtaccgccccaagaccctggacgatctcgtcgggaacgacgac
gcggtcgatcgcatgcgaaccatggtgcggagcggcttcatgccaaacttgatcttttcc
ggtcccccggggtgcgggaagacgtccgcgatcggcgtgctggcgcgagagctgctggga
gataaatacaaggaggcggtgctggagatgaacgcgagcgacgagcgagggatcgatgtg
gtgaggaataagattaaaatgtttgcgcagaaaaaggtgacgctcgcgccgggacgaacg
aaactggtgatattggacgaggcggatagcatgacgacggcggcgcagcaagcgatgcga
agaacgatggagatttacagcgcgacgacgcggtttgcgttggcgtgtaacacgagtgag
aaggtgatcgaaccgattcagtcgcggtgcgcgatcgtgcggttcgggaaactgacggac
gcacaggttttgaagaggttgatgaccgtggtggaggcggagaaggtgacgtacgtgccg
aaaggtttagaggcgatcgtgttcaccgcggatggggacatgagacaggcgttgaataac
ttgcaatcgacggcgctcggtttcgggatggtgaacgaggaaaacgtgtttcgagtgtgc
gatcaaccgcatccgaacatcgtgcgagacgcgttttcgttcattttgcaagggaacgtc
gatgacgcgtacgcgcgcttgaagtcgctgcacgaccaagggtattcggtgttcgacatc
atcggcaccatgtaccgagtgtgtaaaaattttgacgatacggcgatgccagagttcatc
aagctcgagttgattcgcatcataggattcacgcatttgcgcctttccgagggatgcgcg
acgatgattcagatcggcggcggcgtcgcgcgcatggtcgagctcgtgagcgacgcgaag
aagatgggcggatacagcgccgagctcggcctagacgcgctttag
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