Ostreococcus lucimarinus: OSTLU_39499
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Entry
OSTLU_39499 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OSTLU_39499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_39499
Enzymes [BR:
olu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
OSTLU_39499
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
HECT type E3
OSTLU_39499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
5004607
NCBI-ProteinID:
XP_001420771
JGI:
39499
UniProt:
A4S5H1
LinkDB
All DBs
Position
12:complement(163592..165154)
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AA seq
520 aa
AA seq
DB search
MSTSASRILLLDGDEPLVTARNVSLPEESFIHGKLTGKLARQLQDTLTLCGSATPTWCTA
LARVCPWLFPFELRHKLFKCVSFSLSRTLHHLHGNGSDSGAVTTDGGREIRIGRLQRQKV
RVNRGQIFESAKKVFDIPNTLKMVLEVEFFEEVGTGTGPTLEFFTLLSKQFKRRKLNLWR
DSGVANEDDLVVAPHGLFPAPITPPRLGGKTHASRLKNFKLLGQSIGKVLQDGRMLDLPL
APAFYRMLLGRSLGLHDLIEIDPGLGNTLRRLDAAANEIETMKREGRPESEWRNVTVDGV
NIEDLCLTFVIPGASMELIKGGSEVGVNEVNLREYVDTIVDACVGSGVAAYFESVRTGLE
QVVPLARLQMFNESELEAVICGQGEQWTPEMLTECITFDHGYNALSPPIKNFCDILSAFT
PNQQRSFMRFVTGAPRLPPGGLASLQPRLTVVCKQPSSTVGLSSIDSAPVAAGTPLADGD
LPSAMTCASYLKLPPYSCKEIMLERLTYAMSEGQGSFDLS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttcagcgtctcgcattttactcttggacggcgacgaaccgctcgttacggct
cgcaatgtttcgttgcctgaagaatcgttcattcatggaaagctcactggaaagctcgcg
cgtcagttgcaagatactttgacgctttgcgggtcagcgacgccgacgtggtgcactgca
ctcgctcgagtctgcccttggttgttccctttcgagcttcgtcacaagctcttcaaatgc
gtctccttttctctgtctcgcacgctccatcacctccatggcaatgggagcgatagtggg
gcggtaactacagatggtggacgcgaaattcgaatcggtcgtttacagcgacaaaaagtc
cgagtgaatcgagggcaaatcttcgaaagcgcaaagaaggtgttcgacattccaaacacg
ctcaagatggtgctagaggtcgagtttttcgaagaggtgggcactggtactggaccaacg
cttgagttcttcaccttgctatcgaagcagttcaagcgtcgcaagttgaatctctggcgg
gactctggtgtggcaaacgaggatgatctcgtcgtagctcctcacggtttgttcccggcg
ccaatcaccccgcctcggctcggcggcaagactcacgcaagtcgtctgaagaacttcaaa
cttcttggtcaatcgataggcaaagttttacaagatggtcgaatgctagatttacctctg
gcgccggcgttttatcgaatgcttctcgggcgatcgctgggactccacgatctcatcgaa
attgatcctggtctcggaaacacgttgcgacgactcgacgcagccgcgaatgagatcgag
accatgaagcgcgaaggtcgacccgaaagtgaatggagaaacgtcactgttgacggagtg
aatatcgaagacctgtgtctcacgtttgtcatcccgggagcttccatggaactcatcaag
ggtggttcggaagttggcgtgaacgaggtcaacttgcgagagtacgtggacaccatcgtc
gacgcgtgcgtaggatctggcgtcgcggcttattttgaatcagttcgtactggtttggaa
caagtcgttcctctcgctaggctgcagatgttcaacgaaagcgaactggaagcagtcatt
tgcggacaaggtgaacagtggacgccagaaatgctcaccgagtgcattacttttgatcac
ggctacaatgcgctttctccgccgatcaagaacttctgtgacattctcagtgctttcacg
ccgaatcaacaacggtcattcatgcgattcgtcactggtgcaccgaggcttcctcctggc
ggcctagcgtcacttcaaccgcgtctcactgtggtttgcaagcaaccttcctcaacggtt
ggtttgtcatccatcgactctgctcccgtcgcggccggaacgccgctggcggacggcgac
ttgccttctgcgatgacttgcgcgagttacttaaagcttccgccgtactcatgcaaggaa
atcatgctggaacgtttaacttacgcgatgagcgaggggcaaggaagctttgatctctcc
taa
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integrated database retrieval system
