Ostreococcus lucimarinus: OSTLU_39835
Help
Entry
OSTLU_39835 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OSTLU_39835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_39835
Enzymes [BR:
olu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OSTLU_39835
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
OSTLU_39835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
4999735
NCBI-ProteinID:
XP_001416013
JGI:
39835
UniProt:
A4RS40
LinkDB
All DBs
Position
1:complement(1049178..1052618)
Genome browser
AA seq
1146 aa
AA seq
DB search
MDCLTRDPSKITAPIATLEDKYELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIIHAKANE
RVTCDSDPNFYLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKE
IVTRQAKNGVGGVVIGRIPLMLRSSRCVLTGKNEDELARLGECPLDPGGYFIVKGVEKVI
LIQEQLSKNRIIIEVDAKGEIGASVTSSTHERKSKTNIVVKHGKFYLRHNTFADDIPIMI
VLKAMGLESDQEAVQMIGSEPAYAMLLGPTLQECQAAGVFTTQQALEYCANKVRVVKTHM
TNRPGVRNFGRSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQI
DDKDYYGNKRLELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDT
LSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRA
LQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDEEEPLRRLAHALGVEPLTWLNAGE
MHSPSGAHVLMNGSLLGVHAQPEAFSHAFRKLRRAGRIGEFVSVYTADGCVYISSDGGRV
CRPLIIIERGEPLLTQEHLDELKDGHRTFNDFLREGLVEYLDVNEENNSYIALYEDEVND
ETTHLEIEPFTLLGVCAGIIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLNRMDTLMYLL
VYPQKPIVKTKTIELIGYDRLGAGQNATIAVMSYSGYDIEDAIVMNRASLDRGFGRCTVL
RKYSAQVKKYSNRTMDRIVGPKDDHRANQNSRHHLLDDDGIAAVGGRIKPGDIYVNKQTP
VNTRDPMANPHAMPDTMYRSNPLSYKGPAGESAIVDKVLLTMTDEGQFNIKTLVRQTRRP
EVGDKFSSRHGQKGVCGIILDQEDFPFSERGITPDLIMNPHGFPSRMTVGKMIELLGGKA
GLESGRFHDGTAFGGDTVEAIQQTLVESGYSYKGKDMLHCGITGEALEVNVFMGPVYYQK
LKHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMIS
SDQFEAQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQELQSMNIAPR
LSLTEA
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggactgcctcacgcgcgacccctcgaagatcaccgctccgatcgcgacgttggaggat
aaatacgagctcctgccggcgtttctcaaggtgagagggctggtcaggcagcacatcgac
tcgttcaactacctggtgaacgaggagatcaaaaaaatcattcacgccaaggcgaacgag
cgagtgacgtgcgatagtgatccaaacttttacctgaagtacacgaatatacacgttgga
cgaccgagcgtggaggaagattacgtggtggaggaaataacgccgcagcagtgtcgattg
cgagacatgacgtacgcggcgccgattacggtggatgtggagtacacgcgtgggaaggag
atcgtgacgcgtcaggcgaagaatggtgtgggtggcgtcgttattggacggattcctttg
atgctgcgaagctcgcggtgtgtgttgaccggaaaaaatgaggacgaattggcgaggttg
ggggagtgtccgttggatccgggtggatacttcatcgtcaagggcgtggagaaagtgatt
ttgattcaagagcagttgagcaagaatagaattatcatagaagtcgacgccaaaggagag
attggggcatcggtgacttcgtcgacgcacgaacggaagagtaagacaaacatcgtagtc
aagcacggaaagttctaccttcgacacaacacgtttgcggacgacattccaatcatgatc
gttctcaaggcaatggggttggagagcgatcaagaagcggtgcaaatgatcggatcggaa
ccagcgtacgcgatgcttttggggccgactttacaggagtgtcaagcagctggagttttc
actacgcagcaggcgctagagtattgcgcgaacaaggtgcgcgtggtgaagacgcacatg
acgaatagaccgggtgtgcgaaacttcggtagatcgcgcgtagatgaagcgcgcgacatt
cttgccggcgtcgtactcgcacacgtgcccgtgacgtcgtatgactttaggcaaaagtgc
gcttacatttccatcatggttcgcagaattctgaacgcgatgctcgacccgacgcagatc
gatgacaaggactactatggtaacaagcgtcttgaactcgccggtcagctcattgcccta
ttgtttgaagattgcttcaaacgtttgaacgctgatttgaagcgacaagccgacgccgtg
ctttccaaagcaaatcgtgcgacgcagtttgacatcttaaagtgcattcgtcaagacacc
ctgagtaacggcctggaacacgcaatttcgagcggtaactggacggtaaagcgttttaga
atggaacgaaaaggcgtgactcaagtgctgagtcgactgagtttcatcagcgcgctcggt
atgatgacgcgcataacgtctcagtttgaaaagaccagaaaggtttccggtccgcgggcg
ttacaaccgagtcaatgggggatgctctgcccgagtgacactcccgaaggagagtcatgc
gggctcgtaaaaaacttggcgctgatgacgcacgtcacgacggatgacgaggaggagccg
cttcgccgtttagcacacgcgctcggtgtagaaccgcttacgtggttaaacgccggtgag
atgcattcgccgtctggtgcgcacgttttgatgaacggttccctgctcggcgtgcacgcg
caacccgaagcgttctcgcacgcgtttagaaagctgcgacgggcggggcgaattggtgag
ttcgtttctgtgtacactgcggatggatgcgtgtacatttcttcagacggtggacgagtg
tgtcgaccactcatcatcatcgagcgtggtgagcctttactgactcaagaacatctcgac
gagctgaaagatggtcatcgtacgttcaatgatttcctacgcgaaggattagtcgagtac
ctggacgtgaatgaagagaacaattcgtacattgcgttgtacgaagacgaggtgaacgac
gagacgacgcacttggagattgaacctttcactttgcttggcgtttgtgctggcatcatc
ccgtatcctcatcacaatcagtcaccgcgaaatacatatcaatgcgccatgggtaagcaa
gcgatgggtaatattgcgttcaatcaattaaaccgaatggacacgttgatgtacttgctc
gtatacccgcaaaagccaatcgtcaagacaaagaccatagagttaataggctatgatcgt
ctcggtgcgggtcaaaatgcgacaattgccgtgatgtcgtatagtgggtacgacatcgaa
gacgccatcgtgatgaatcgcgcgtctcttgaccgaggttttggccggtgcacggtgttg
cgcaaatactctgcgcaggtgaaaaagtatagcaatagaaccatggaccgaatcgtcggg
cccaaagatgatcatcgcgcgaaccaaaatagtcgacatcacttattagatgatgatggc
atcgccgccgtcggtggtcgcatcaagcctggtgacatttatgtcaacaagcaaacgccg
gtgaacactcgggatccgatggcgaatccgcacgcgatgccagacaccatgtatcgctcg
aatccgctttcatacaaaggtcccgcaggtgaatcggcgattgttgataaagtcttactc
acaatgacggatgaagggcaattcaatatcaagacgctcgtgcgtcagacgcgtcgacca
gaagttggtgataagttttcttctcgtcatggccagaaaggcgtttgcggcatcatcctc
gatcaggaagatttcccgttcagcgaacgtgggattactcctgacctcatcatgaacccg
cacgggttcccgtcacgtatgacggtcggaaagatgatcgaacttctcggcggtaaggct
ggactcgagagcggccgcttccacgacggaaccgcgtttggtggagacacggttgaagcc
attcaacaaaccttggttgaatccgggtactcttacaaaggcaaggacatgcttcactgt
ggaatcaccggcgaagcgcttgaagtcaacgttttcatgggtccagtgtactatcaaaag
ctcaaacacatggttcaggacaagatgcacgctcgcgcgcgcggtcctcgcgtcgtcctc
acacgccaacccaccgaaggtcgagcccgcgacggtggtttgcgcctcggcgagatggaa
cgcgattgcctcatcggttatggcgcatcacaacttattttggagcgtttgatgatctct
tccgatcaattcgaagcgcaagtctgcaccaagtgcggcttgctcggattccagcaccac
atcacccgcaggaacgcgtgcacgctgtgcaaaactgaggccgaagtcgcgacgttaaag
ctcccgtacgcgtgcaagctcttattccaagagttgcaatccatgaacatagcacctcgg
ttatctttgaccgaggcttag
DBGET
integrated database retrieval system