KEGG   Ostreococcus lucimarinus: OSTLU_39835
Entry
OSTLU_39835       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OSTLU_39835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_39835
Enzymes [BR:olu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OSTLU_39835
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     OSTLU_39835
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 4999735
NCBI-ProteinID: XP_001416013
JGI: 39835
UniProt: A4RS40
LinkDB
Position
1:complement(1049178..1052618)
AA seq 1146 aa
MDCLTRDPSKITAPIATLEDKYELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIIHAKANE
RVTCDSDPNFYLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKE
IVTRQAKNGVGGVVIGRIPLMLRSSRCVLTGKNEDELARLGECPLDPGGYFIVKGVEKVI
LIQEQLSKNRIIIEVDAKGEIGASVTSSTHERKSKTNIVVKHGKFYLRHNTFADDIPIMI
VLKAMGLESDQEAVQMIGSEPAYAMLLGPTLQECQAAGVFTTQQALEYCANKVRVVKTHM
TNRPGVRNFGRSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRILNAMLDPTQI
DDKDYYGNKRLELAGQLIALLFEDCFKRLNADLKRQADAVLSKANRATQFDILKCIRQDT
LSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRA
LQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDEEEPLRRLAHALGVEPLTWLNAGE
MHSPSGAHVLMNGSLLGVHAQPEAFSHAFRKLRRAGRIGEFVSVYTADGCVYISSDGGRV
CRPLIIIERGEPLLTQEHLDELKDGHRTFNDFLREGLVEYLDVNEENNSYIALYEDEVND
ETTHLEIEPFTLLGVCAGIIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLNRMDTLMYLL
VYPQKPIVKTKTIELIGYDRLGAGQNATIAVMSYSGYDIEDAIVMNRASLDRGFGRCTVL
RKYSAQVKKYSNRTMDRIVGPKDDHRANQNSRHHLLDDDGIAAVGGRIKPGDIYVNKQTP
VNTRDPMANPHAMPDTMYRSNPLSYKGPAGESAIVDKVLLTMTDEGQFNIKTLVRQTRRP
EVGDKFSSRHGQKGVCGIILDQEDFPFSERGITPDLIMNPHGFPSRMTVGKMIELLGGKA
GLESGRFHDGTAFGGDTVEAIQQTLVESGYSYKGKDMLHCGITGEALEVNVFMGPVYYQK
LKHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGASQLILERLMIS
SDQFEAQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQELQSMNIAPR
LSLTEA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggactgcctcacgcgcgacccctcgaagatcaccgctccgatcgcgacgttggaggat
aaatacgagctcctgccggcgtttctcaaggtgagagggctggtcaggcagcacatcgac
tcgttcaactacctggtgaacgaggagatcaaaaaaatcattcacgccaaggcgaacgag
cgagtgacgtgcgatagtgatccaaacttttacctgaagtacacgaatatacacgttgga
cgaccgagcgtggaggaagattacgtggtggaggaaataacgccgcagcagtgtcgattg
cgagacatgacgtacgcggcgccgattacggtggatgtggagtacacgcgtgggaaggag
atcgtgacgcgtcaggcgaagaatggtgtgggtggcgtcgttattggacggattcctttg
atgctgcgaagctcgcggtgtgtgttgaccggaaaaaatgaggacgaattggcgaggttg
ggggagtgtccgttggatccgggtggatacttcatcgtcaagggcgtggagaaagtgatt
ttgattcaagagcagttgagcaagaatagaattatcatagaagtcgacgccaaaggagag
attggggcatcggtgacttcgtcgacgcacgaacggaagagtaagacaaacatcgtagtc
aagcacggaaagttctaccttcgacacaacacgtttgcggacgacattccaatcatgatc
gttctcaaggcaatggggttggagagcgatcaagaagcggtgcaaatgatcggatcggaa
ccagcgtacgcgatgcttttggggccgactttacaggagtgtcaagcagctggagttttc
actacgcagcaggcgctagagtattgcgcgaacaaggtgcgcgtggtgaagacgcacatg
acgaatagaccgggtgtgcgaaacttcggtagatcgcgcgtagatgaagcgcgcgacatt
cttgccggcgtcgtactcgcacacgtgcccgtgacgtcgtatgactttaggcaaaagtgc
gcttacatttccatcatggttcgcagaattctgaacgcgatgctcgacccgacgcagatc
gatgacaaggactactatggtaacaagcgtcttgaactcgccggtcagctcattgcccta
ttgtttgaagattgcttcaaacgtttgaacgctgatttgaagcgacaagccgacgccgtg
ctttccaaagcaaatcgtgcgacgcagtttgacatcttaaagtgcattcgtcaagacacc
ctgagtaacggcctggaacacgcaatttcgagcggtaactggacggtaaagcgttttaga
atggaacgaaaaggcgtgactcaagtgctgagtcgactgagtttcatcagcgcgctcggt
atgatgacgcgcataacgtctcagtttgaaaagaccagaaaggtttccggtccgcgggcg
ttacaaccgagtcaatgggggatgctctgcccgagtgacactcccgaaggagagtcatgc
gggctcgtaaaaaacttggcgctgatgacgcacgtcacgacggatgacgaggaggagccg
cttcgccgtttagcacacgcgctcggtgtagaaccgcttacgtggttaaacgccggtgag
atgcattcgccgtctggtgcgcacgttttgatgaacggttccctgctcggcgtgcacgcg
caacccgaagcgttctcgcacgcgtttagaaagctgcgacgggcggggcgaattggtgag
ttcgtttctgtgtacactgcggatggatgcgtgtacatttcttcagacggtggacgagtg
tgtcgaccactcatcatcatcgagcgtggtgagcctttactgactcaagaacatctcgac
gagctgaaagatggtcatcgtacgttcaatgatttcctacgcgaaggattagtcgagtac
ctggacgtgaatgaagagaacaattcgtacattgcgttgtacgaagacgaggtgaacgac
gagacgacgcacttggagattgaacctttcactttgcttggcgtttgtgctggcatcatc
ccgtatcctcatcacaatcagtcaccgcgaaatacatatcaatgcgccatgggtaagcaa
gcgatgggtaatattgcgttcaatcaattaaaccgaatggacacgttgatgtacttgctc
gtatacccgcaaaagccaatcgtcaagacaaagaccatagagttaataggctatgatcgt
ctcggtgcgggtcaaaatgcgacaattgccgtgatgtcgtatagtgggtacgacatcgaa
gacgccatcgtgatgaatcgcgcgtctcttgaccgaggttttggccggtgcacggtgttg
cgcaaatactctgcgcaggtgaaaaagtatagcaatagaaccatggaccgaatcgtcggg
cccaaagatgatcatcgcgcgaaccaaaatagtcgacatcacttattagatgatgatggc
atcgccgccgtcggtggtcgcatcaagcctggtgacatttatgtcaacaagcaaacgccg
gtgaacactcgggatccgatggcgaatccgcacgcgatgccagacaccatgtatcgctcg
aatccgctttcatacaaaggtcccgcaggtgaatcggcgattgttgataaagtcttactc
acaatgacggatgaagggcaattcaatatcaagacgctcgtgcgtcagacgcgtcgacca
gaagttggtgataagttttcttctcgtcatggccagaaaggcgtttgcggcatcatcctc
gatcaggaagatttcccgttcagcgaacgtgggattactcctgacctcatcatgaacccg
cacgggttcccgtcacgtatgacggtcggaaagatgatcgaacttctcggcggtaaggct
ggactcgagagcggccgcttccacgacggaaccgcgtttggtggagacacggttgaagcc
attcaacaaaccttggttgaatccgggtactcttacaaaggcaaggacatgcttcactgt
ggaatcaccggcgaagcgcttgaagtcaacgttttcatgggtccagtgtactatcaaaag
ctcaaacacatggttcaggacaagatgcacgctcgcgcgcgcggtcctcgcgtcgtcctc
acacgccaacccaccgaaggtcgagcccgcgacggtggtttgcgcctcggcgagatggaa
cgcgattgcctcatcggttatggcgcatcacaacttattttggagcgtttgatgatctct
tccgatcaattcgaagcgcaagtctgcaccaagtgcggcttgctcggattccagcaccac
atcacccgcaggaacgcgtgcacgctgtgcaaaactgaggccgaagtcgcgacgttaaag
ctcccgtacgcgtgcaagctcttattccaagagttgcaatccatgaacatagcacctcgg
ttatctttgaccgaggcttag

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