Ostreococcus lucimarinus: OSTLU_40782
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Entry
OSTLU_40782 CDS
T01029
Name
(RefSeq) predicted protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OSTLU_40782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_40782
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OSTLU_40782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
YL1
Mucin
Motif
Other DBs
NCBI-GeneID:
5002498
NCBI-ProteinID:
XP_001418476
JGI:
40782
UniProt:
A4RYZ1
LinkDB
All DBs
Position
6:complement(425163..428504)
Genome browser
AA seq
1113 aa
AA seq
DB search
MVIESSDDDGGSDFDAEAEEEDDDDEAFEADSSEASSEDEEEEDDDDFSESESTPVKKKK
TTKVAVKKVVPTSTTNGRKKTTVNTTSAPTKATEAKDLNAQDVLAGVGPEQYDARDRLKF
PFMQPEKIKDADGRRPDDPDYDPSTLLLPSTFPKMRDASGVQWTVSPGQAQWWKFKAANF
DSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMRGEQPHAGFPEKNYAMHAEQLARNGHRVV
CIEQTETPAQLAERKKKDKTCKDTVVRREMVQVLTKGTMVDTGMLNSSPDAAFVCSIIDG
CEEEDGEGWVGLCAADCGTGRFLVGAWRDDEGASCLRTALAELRPVEILVPPTGLSARAK
MAVLDMCSHAQQRTFKSTSANEALEDAEAEGYFKTLKTGLPEAIKEMRDTACHPARECGI
GAWGTVVAYLRAALIDADLVPQGRVESLHTTDAGAREHLARWAHSTHVAMDAAALSGLEV
LENTAGGSAGTLLASLDRCVSGPGRRLLRRWVCRPLTSASAIRARQVAVSMMRGCGIEAT
GIARKLLRAAPDAERAISRVVGSSGEKGRSASHVVLYEDAARAKLNDFLAALEGIRAVRD
ATKAIAACVDACEKSDVLRALCIVNDAAATREDVFTAVGGVAMPDLSALDEMESAFDWNA
AKSSGRIEPAQGVDADLDAAEEQLTAADADLASWLEEARGELGGHKTEVCFVNANKDTHL
VEVPDRLASKVPHHWVREGKRKGYERFTCDDLVPLRAKRVAAEEAREDALAGVFRRIVAK
FCENASEWQAAASVGAIIDVLASLAVVSEEMYASCGAVCTPKVHPQPRDGEPATLESVGL
SHPCASSLARAFVPNDARLGGKHPGFCLITGPNMGGKSTYLRQVCLAAIMAHVGADVPAA
KFEMTAMDAVFVRMGAKDNLAGGQSTFMVELSETGAMLRRATTNSLVALDELGRGTATAD
GTAIACAVASHLIDKRCRTLFSTHYHRLADDHARDPHVALAHMACRVETPSGAGVETLGR
ETVTFLYTLASGNCPRSYGVNVARLAGLPESVCLAAARRAAHLEAGQLEKLVGDERSRER
VVDACREVLRDVSAADLTEPNVRRAQDKARTAL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcgagtcgagcgatgacgatggtgggagcgatttcgacgcggaggcggaggaa
gaggacgacgacgacgaagcgtttgaggcggattcgagcgaggcgtcgagcgaagacgag
gaagaggaggacgacgacgatttctcagagagcgagtcaacgccggtgaagaagaagaag
acgaccaaagtggcggtgaagaaggtggtgccgacgtcgacgacgaatggacgaaagaag
acgacggtgaatacgacgtcggcgccgacgaaggcgacagaggcaaaggatttgaacgcg
caggacgttctcgcaggcgtcggtccggagcaatacgacgcgcgagatcggttgaaattt
ccatttatgcaaccggagaagattaaggatgccgatggtcggcgtcctgacgatccggac
tacgatccgtccacgttgctgttgccgtcgacgtttccaaaaatgcgcgacgccagcgga
gtgcagtggacggtttcccccgggcaggcgcagtggtggaagttcaaggcggcgaatttc
gattctgtattgttgttcaagatgggcaagttttatgaaatgttcgaaatggacgcgcac
atcggtgtgcgagacttaggattgatgtatatgcgcggcgagcaaccgcacgctggattc
ccagagaagaattacgcgatgcacgccgagcagctcgctcgcaacggtcaccgcgtcgtg
tgtattgaacagacagagacaccagcgcagcttgccgagcgaaaaaagaaagacaagacg
tgcaaggacactgtggttcgccgcgaaatggttcaagtgttgacaaaaggtacgatggtt
gacaccggtatgttgaactcttcgccggatgctgccttcgtttgctctataatagacggc
tgcgaagaggaggacggcgaaggttgggtcggtttgtgcgctgcagactgcggtacgggt
cgtttcctcgtcggtgcgtggcgcgacgacgaaggtgcaagctgtttgcgcacagcactt
gcggagctgcgcccggttgaaatcttagttccgcccactggcttgagcgcgcgagcgaag
atggcagttttggatatgtgctcacacgctcagcagcgtacgtttaagtcgacgagtgcg
aacgaagcgctggaggacgccgaggcggagggatacttcaagacgcttaagactggtttg
ccagaagccattaaagaaatgcgagacactgcatgccatcctgctcgcgaatgcggtatc
ggagcgtggggcacggtcgttgcgtacttacgcgccgcgctgatagacgccgatttagtg
ccacaagggcgagtagagtccctgcacacaacagacgccggcgcgcgggagcacttggcg
cgatgggcacactctacgcatgtcgccatggatgccgctgcactttctgggcttgaggtg
ctcgagaataccgcaggtggctccgcgggtacgcttttggcgtcgctcgatcggtgtgtg
agcgggcccggtcgtcgtttgttgcgccgttgggtgtgtcgccctttgacaagcgcgtca
gctattcgagctcgacaagtcgccgtctctatgatgcggggatgcgggatcgaggccaca
gggattgcgcgcaagcttttgcgcgccgcgccagacgcggaacgcgccatctcgcgcgtt
gtcggatcgagcggcgagaaaggtcgatccgcctcgcacgtcgtcttgtatgaagatgcg
gcgcgagcaaagttgaacgatttcctcgcagcgctcgagggtattcgtgcggttcgcgac
gctacaaaagcgatcgcggcgtgcgttgatgcatgtgagaaatctgacgtgcttcgcgca
ttgtgcatcgtaaacgacgccgcggcgacgcgcgaggacgtgttcaccgcagtcggcggc
gtcgcgatgccggatctgagcgcgctggacgaaatggagtctgcgttcgattggaacgcc
gccaaatcgagtgggagaatcgagccggcgcaaggcgtcgacgccgatctggacgctgcc
gaggagcaacttacagcagcggacgcggatctggcgtcgtggttggaagaggcgcgcggc
gagctcggtggtcacaaaacggaggtttgtttcgtgaatgcaaacaaagatacgcatctt
gtcgaagttcctgaccgcctcgcgtccaaggtccctcatcattgggtgcgtgaaggtaag
cgcaaaggatacgaacggttcacgtgcgatgatttggtacccttgcgcgcgaagcgagtt
gcggcggaggaagcgcgcgaggacgcgctcgccggcgtgttccgtcgaatcgtcgcaaag
ttttgcgagaacgcttcggagtggcaagcggcggcaagtgttggtgcaatcatagatgtt
ctagcctctttggctgtcgtgagcgaggaaatgtacgcttcttgtggagcagtttgcacc
ccgaaggtgcacccgcaaccgcgagacggcgagcccgcgacgcttgagtccgtcggcctg
tcgcacccgtgcgcgtcttctctcgcgcgcgcgttcgttccgaacgacgccaggcttggt
ggtaaacatccgggtttctgtctcatcactggtccgaacatgggtggcaagtccacgtac
ctcaggcaagtctgcttggccgcgatcatggcgcacgtgggcgccgacgttcccgcggcc
aagtttgagatgacagctatggatgcggtttttgtgcgcatgggcgccaaagacaattta
gcgggtgggcagtcgacattcatggtcgagctcagcgaaactggagcgatgcttcgtcga
gcgacgacgaattccctagtcgcgctcgacgaactcggcagaggaaccgccaccgcggac
ggtacagccatcgcgtgtgcggttgcgtcgcatctcatcgacaagcgctgccgtacgctc
ttcagcacgcattaccatagactcgccgacgaccacgcgcgcgaccctcacgtggcgttg
gcacacatggcgtgtcgagtcgagacgccgagcggagcaggtgtcgagacgctcggacgc
gaaacggtcacctttctgtacaccctcgcgagcggcaactgtccgcgaagctacggtgtc
aacgtcgcgcgtctcgctggtttacccgagagcgtttgcctcgccgccgcgcgtcgcgcg
gcacacctcgaggctggccaactggagaagctcgtcggcgacgagcgcagtcgcgagcgc
gtcgtcgacgcgtgccgcgaagtcctccgcgacgtctccgccgcagacttgaccgaacca
aacgttcgtcgcgcgcaagataaagcccgaaccgccctgtga
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