Ostreococcus lucimarinus: OSTLU_41510
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Entry
OSTLU_41510 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OSTLU_41510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_41510
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_41510
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OSTLU_41510
Coactivators
SAGA/TFTC/STAGA complex
OSTLU_41510
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
OSTLU_41510
STAGA complex
OSTLU_41510
TFTC complex
OSTLU_41510
SAGA complex
OSTLU_41510
SLIK complex
OSTLU_41510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
DUF5739
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
5005078
NCBI-ProteinID:
XP_001421048
JGI:
41510
UniProt:
A4S686
LinkDB
All DBs
Position
13:complement(join(<93162..94124,94261..94446))
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AA seq
383 aa
AA seq
DB search
MSAPSRVHVDSVRAIAATIGAPPVDADAARALASDCEYRLRQVFQDAMKCMRASKRTTLS
AEDVNAALRLRNCEPLYGFGAGTSDYEYKQTREDPDVFYVEDREIDMRELLTRKLPRPPI
EVNLVPHWLAVEGVQPMIPENPMVPAAEPVAIEPPRGMKRPRPRAMGAKENGGDPDAGGL
LPVVSHTLSRELQFYFDKVTALIRQAGRADASDREVELLSTALRSLSADVGLHNLMPYFT
QFITEETTQNLRDLPRLRVLIQMIRALISNPDINVELYLHQLMPSVVTCVVAKRLCQNLD
EDHWSLRDDAAYTMAFICGKFGDAYPSIRPRITRTLLRALLDTKPMTTHYGAIRGLHALG
PKVVRETVMPNLRSYLNTLEPLL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgagccgcgtgcacgtcgattccgtgcgcgcgatcgcggcgacgatcggc
gcgccgcccgtggacgccgacgccgcgcgcgcgctggcgagcgattgcgagtaccggctg
cgacaggtgtttcaagacgcgatgaaatgcatgcgggcgtcgaaacgaacgacgctctcg
gccgaggacgtcaacgcggcgctgcgattgagaaattgcgaaccgctgtatggattcggg
gcgggaacgagcgattatgaatataaacagacgcgcgaggatccggatgtgttttacgtg
gaggaccgagagatcgacatgcgggaattgctgacgaggaagttgccgagaccgccgatc
gaggtgaacttggtgccgcactggttggcggtggagggagtgcagccgatgattccagag
aacccgatggtgcccgcggcggaaccggtggcgatcgaacctccgcgtgggatgaaacgg
ccgcggccgcgagcgatgggggcgaaagagaatggtggggatccggacgcgggaggattg
ttacccgtggtgtcgcacacgctgagccgggaattgcagttttatttcgacaaggtcacg
gcgctgattcgacaggctggacgcgccgatgcgagcgaccgtgaagttgaattgctctcc
accgcgctgcgatcgctgagcgcggacgtcggtctgcacaatttgatgccttactttacg
cagttcatcaccgaggagacgacgcaaaacctgagggatttgccgcggttgcgagtgttg
attcagatgattcgggcgttaatttccaaccccgacataaacgtggagctgtatttacac
cagctcatgccgagcgtggtgacgtgcgtggtggcgaagcgtttatgtcaaaatttggac
gaagaccactggtcgctgcgagacgacgcggcgtacaccatggcgttcatttgcggcaag
ttcggcgacgcctatccaagcattcgacctaggatcacgcgcacgttgttgcgggcgtta
ttggataccaaaccaatgaccacgcactacggcgcgattcgaggcttgcacgctctcggt
cccaaggtcgtgcgagagacggtgatgcccaacttgcgctcgtacttgaacacgctcgag
ccgttgctc
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