Ostreococcus lucimarinus: OSTLU_42332
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Entry
OSTLU_42332 CDS
T01029
Name
(RefSeq) predicted protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_42332
Enzymes [BR:
olu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSTLU_42332
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OSTLU_42332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
5003299
NCBI-ProteinID:
XP_001419134
JGI:
42332
UniProt:
A4S1E1
LinkDB
All DBs
Position
8:336743..342046
Genome browser
AA seq
1767 aa
AA seq
DB search
MDGGRKALPPGTTRIVHPEGYEEISVPAREPDPVAAGERSVAIEELDEWAQPAFQGIRML
NRIQSKIFPQAYHTNENLLVCAPTGAGKTNIAMLTVLHEIGLHIDENGDYLPEDFKIVYV
APMKALAAEVTDAFSRRLAPLDIVVAELTGDTQMSKRELEETQMIVTTPEKWDVITRKGG
EVSVASTLRLLIIDEVHLLNDERGPVIETLVARTLRQVEQTQSMIRIVGLSATLPNPVDV
ARFLGVNNDAGLFVFDQSYRPIPLTQKFIGVTEKNSMKRQTLMAQIAYNKACEALRNGKQ
AMVFVHSRKDTVKTAKQLAEFAAAQDGMELFSNNQHERKAEFAQQVSRSRNNELKDLFLK
GLGCHNAGMLRADRSLTEKLFAAGLIKVLVCTATLAWGVNLPAHIVVIKGTQLYDPQRGG
FRNLGVLDVQQIFGRAGRPGFDTSGEGVIVTEHKNLAHYVSMLTHSTPIESQFVSNLADN
LNAEVTLGTVTNVREGAQWLGYSYLHTRMEKNPLAYGLTWDDIRLDPGLLDHRRKLIKEA
ARVLDRAKMIRFDERSGQLYQTEAGRTASHFYIRVNSMEVFDGLMHRHMTLPDIFHMISH
SSEFENIVPREDEIPELETLRRNRRVVPIDIKASLTDKVGKVNLLLQVYISRASMQSFSL
IADSMYISQNASRICRALFELCLRRGWPSLAEQLLTVSKSCDLRIWPHQHELRQFEKSLK
PEVLFKLEEKKATLDRLWDMSASEIGSMLRLNTQIGGQVKSCMRAMPHLNMTAVVQPITR
SVLRVSVTLTPEFEWRDAVHGALQRWLIWVEDPVNEHIYHSETFNLSKKQSRDGAQYLAF
TIPIFEPVPPQYFLRAMSETWLGCESFVELNFQHLILPEEHPPHTELLDLDPLPRSALNN
PVYESMYEGKFTHFNAIQTQAFHTLYHTDTNVLLGAPTGSGKTISAELSMMKVFRDSPGS
KVVYIAPLKALVRERIKDWRKNLCPTLGLRMVELTGDYTPDLRALLQADIIVSTPEKWDG
ISRNWQSRAYVTKVALVVIDEIHLLASDRGPILEVIVSRMRYISARTGSNVRIVGLSTAL
ANARDLGDWLGIDKEGLFNFRPSVRPVPLECHIQGFPGKFYCPRMMTMNKPTYAAIRTHS
PEKPTLVFVSSRRQTRLTALDLIAYAAADERPDGFVHMSDDELTMHLSKVKDPALKHTLQ
FGIGLHHAGLTPEDRELCEELFAQCKIQVLVTTSTLAWGVNLPAHLVVIKGTEYFDGKTK
RYQDFPITDVLQMMGRAGRPQFDKSGCCVILVHEPKKTFYKKFLYEPFPVESSLAENLCD
HFNAEIVSGTIKTKQDAVDYLTWTYFFRRLLKNPTYYNLDTIQTDNLNEYLSDLVENALE
LLEDARCIAIDEEDDGLEPLMLGRVASYYYLQYPSVALFASNIKANSSLESLLETLCGVA
EYDELPVRHNEDKLNTELAEVVADAGGFQVDIRLAEDPHVKTSLLFQCHFLRLPLPLSDY
YTDTKSVLDQAIRILQAMIDVTSDAGWLHTALSTMNLMQMIMQGRMITDSSLLTLPHIER
RHLRNLEKHGLSILPQLMDLCSSNKQQARRVLSECGINGRKIDQVVDLCLRLPVIDAKAT
TETTKGINGEKTVHVKLRRIGKKCGSKAPTSYTPRFPKIKEEGWWIVVGDTANDELLALR
RISFGDAANVKLKCPSGSSSRARPDLVVFLMSDSYIGLDQEVKIDSNTMVDEDSSDEFAE
DDDTFWALPPDSTEPFWLGEGENTLLT
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgggcgcaaagcgttgccgccagggaccacgcgcatcgttcatccagaaggg
tacgaagagatctctgtaccggcgcgagagccagatcccgtggccgctggtgagcgttct
gtagcgattgaagagctcgatgagtgggcgcagcccgcgtttcaaggcatcagaatgctc
aataggatccaaagcaagattttcccgcaggcgtaccacaccaacgaaaacttactcgtg
tgcgcgccgacgggagccgggaagacgaacatcgccatgctaaccgtcttacacgaaatc
ggtcttcacatagatgagaacggcgactaccttccagaggatttcaagattgtctacgtg
gcacccatgaaagcgctcgcggctgaagttacggatgcatttagcagaagacttgcacct
cttgacatagtcgttgccgagctcacgggcgatacgcaaatgagtaaacgcgagctcgag
gagacacaaatgatcgtgacgacacccgagaaatgggatgtcatcacacgaaaaggcgga
gaagtttctgtggcgagtactttacgtttactcatcattgatgaggtgcacttgttgaat
gacgagcgggggccggtgattgaaacgctcgtcgcccgtactcttcgtcaagtcgaacaa
actcagagtatgatacggattgtcggtctttctgcgacgctgccgaatcccgtagatgtg
gctcgattcttaggcgtcaacaatgacgccggtttgttcgtttttgatcagtcgtaccgg
ccgatcccattgacgcaaaagtttatcggggtcacagagaaaaactcgatgaaacggcaa
acactcatggcgcagattgcgtacaacaaagcgtgtgaagcgttgagaaatggcaaacaa
gccatggtctttgtacatagccggaaggatacagtcaagacggcgaagcaactcgctgag
tttgccgctgcgcaggatggtatggaactcttctccaacaaccaacacgagcgcaaggct
gagttcgcgcaacaagtgtcacgaagtcggaataacgagttgaaagatctgtttctcaaa
ggactaggctgtcacaacgcaggtatgcttagagcggaccgttcattgacggaaaaactt
ttcgccgccggactcattaaagttctagtgtgtacggcaacattggcgtggggtgtgaac
ttgcccgcgcacatcgtcgtcatcaaaggcacgcagctttacgaccctcaacgcggtggc
ttcaggaatctcggtgttttagatgtgcaacaaattttcggtcgtgcagggcgaccaggt
tttgacacttcgggcgagggtgtcatcgtcaccgagcacaaaaatttggcgcattacgtg
tccatgctcacgcattcgacaccgattgaatcacaatttgtgagcaacttggctgataat
ttgaacgccgaagtgactctcggtacagttacgaacgtgcgcgaaggcgcgcagtggttg
ggatactcttacctacacacgcgtatggagaagaacccactcgcctatggtctgacgtgg
gacgacattcgtcttgatccaggcttactagaccaccgcagaaaactcatcaaagaagct
gcaagggttttagatcgtgcgaaaatgattcgattcgacgagcggagtggacagctttat
caaaccgaagctggccgtacggcgagtcacttttacatacgagtcaattctatggaagtt
ttcgatggtttgatgcacagacacatgacgctgccggacatctttcacatgatttcccat
tcgagcgagttcgaaaacatagttcccagagaagatgaaattcctgagttggagacattg
cgacgcaaccgccgcgtggtgccgattgacatcaaagcctcgctcacagacaaagtaggc
aaagtcaatttactcttgcaagtctacatctctcgtgcgagcatgcaatctttttctctt
attgccgatagcatgtacatttcgcagaatgcgagcagaatttgtcgcgcactgtttgag
ttatgcttacgacgtggctggccgtcgctcgcggaacaattgctcacggtgagtaaatcg
tgtgatttgagaatatggccgcatcaacacgagcttcgacaatttgaaaagtcgctcaag
cccgaagttttgtttaagctcgaagagaagaaagccactttggatcgtttatgggatatg
agtgcgagtgagattggcagtatgttgcgactgaacactcaaattggtggacaagtcaag
tcgtgcatgcgcgcgatgccgcatttgaacatgacggctgtcgtgcagcccatcacgcgc
tccgtgttacgagtctctgtgacacttactcctgaattcgaatggagagatgcagtgcat
ggtgctcttcaacgatggctgatctgggtcgaagatccggtaaacgagcacatatatcac
tcggaaactttcaacttgagtaaaaaacaaagccgcgacggggcgcaatacttggcattc
accattcccatttttgagccagtgccgccgcaatatttcttgcgtgccatgtcggaaacc
tggctcggatgtgaatctttcgtcgaactaaacttccagcacctcatcttacctgaagaa
catccaccgcacacagaattactcgatcttgatcctctcccgcgatcagctttgaacaat
ccagtgtatgagtcgatgtacgaggggaagtttacgcacttcaatgccattcaaacgcaa
gcgtttcacacgctctatcataccgatacgaacgttctccttggtgcgccgacaggctcc
ggtaagacgatttcggccgagctatcgatgatgaaagttttccgtgattctcctggttca
aaagtcgtctacattgcaccgctcaaggctttggttcgagaacgcatcaaggactggaga
aagaatttgtgcccgacgctcggcttgcgcatggtcgagctcacaggtgattacacgcca
gatcttcgagcgcttcttcaggccgatatcatcgttagtactccggaaaagtgggatggc
atcagtcgtaactggcaaagtcgcgcgtacgtcaccaaggttgcgctcgtcgttattgat
gagattcacttgttggcgagcgacagaggtcctattttggaagtcatcgtgtctcgtatg
cgatacatctctgcgcgaacgggttcaaatgttcgtatcgttggtttgtcaacagcgttg
gcgaacgcgcgtgatctcggagattggctcggcattgacaaggaaggtttgttcaacttt
cgaccgtcggtgcgcccggtaccgctcgaatgtcatattcaaggctttccgggtaaattt
tactgcccgcgcatgatgacgatgaataagccaacgtacgcggctattcgcacgcatagt
cctgaaaagccgacgcttgttttcgtgtcgagtcgacgacaaacgcgcctgacagcgttg
gatttgatcgcgtacgctgccgcggacgagcgcccggatggcttcgtgcacatgagcgac
gacgagttaacgatgcacttgagtaaagtcaaagatccagcgttgaagcacaccttacaa
tttggcattggtctacaccacgccggtttaacgccagaagaccgagagttatgcgaagag
cttttcgcacaatgcaagatacaagtgttggtgacgacgtcaacgctcgcgtggggcgtc
aacttgcctgcgcacttggtcgtaatcaagggcactgaatattttgacggcaaaacgaag
cgttaccaagactttcccattacagatgttcttcaaatgatgggtcgagcggggcgaccg
cagttcgataagtctgggtgctgcgtcattctagtacacgagcctaaaaagacgttttac
aagaaatttctctacgagccttttccagttgaatcgagcttggcagaaaacttatgcgac
catttcaacgccgaaatcgtgagtggcacaataaagactaagcaggacgcagtcgattac
ttgacgtggacttactttttccgtcgcttgctcaaaaatcccacttactacaacttggat
accattcaaacagataacttgaatgaatacctcagcgatttggtcgagaacgctttggag
ttattggaggacgctcgttgcattgcaatcgatgaagaagacgatgggttggagcctttg
atgttaggacgtgtcgcatcgtattactacctacagtacccgtccgtcgcacttttcgcg
tcgaatatcaaggcgaatagttcacttgaatcattgctggaaacgttgtgcggtgtggca
gaatacgatgaactacccgttcgtcacaacgaagacaagctcaacacggagttggcagaa
gttgtggctgatgccggtggtttccaagtcgacattcgtctggctgaggacccgcacgtg
aagacatctttgcttttccaatgccacttcttgcggctaccgctacctctgagtgattat
tacacggacacaaagagcgtcctcgatcaggcgattcgtattttacaagcgatgattgac
gtcacttccgatgctggttggctacacaccgcactgagcacgatgaatttgatgcagatg
attatgcagggtagaatgattaccgattcttcgttgttgacgcttccgcacatcgaacgc
agacacttgagaaaccttgagaaacacggcttgtctattttacctcagttgatggatcta
tgctcttccaacaagcaacaggcgcgtcgagttctctcagaatgtggtatcaacggtcgt
aaaattgatcaagtcgtcgatttatgtctgagacttccggtgattgacgccaaggcgacg
acggagacgaccaaaggcatcaatggtgagaagacggtacacgtaaagcttcgacgtatc
ggcaagaaatgcggttcgaaggcaccgacgtcgtatacaccgcgctttccgaaaataaaa
gaagaaggttggtggatagtcgttggagacaccgcgaatgatgaactgttggcgctgaga
cgaatatcgtttggtgatgctgctaacgtcaagctgaaatgtccatccggctcgtcttca
cgcgcacgccccgatttggtggtgtttttgatgtctgactcatacatcggacttgatcaa
gaagtcaagattgactcaaacacgatggttgatgaagattcgagcgatgaatttgctgaa
gacgacgatacattttgggctttgccccctgactcgactgagcctttctggctaggtgaa
ggtgaaaacacgctactaacgtga
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integrated database retrieval system
