Ostreococcus lucimarinus: OSTLU_42368
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Entry
OSTLU_42368 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OSTLU_42368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_42368
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
OSTLU_42368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
SAP
Motif
Other DBs
NCBI-GeneID:
5003289
NCBI-ProteinID:
XP_001419339
JGI:
42368
UniProt:
A4S1C1
LinkDB
All DBs
Position
8:complement(join(<302538..302954,303009..303374,303534..304439))
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AA seq
563 aa
AA seq
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MRLKAVDLKKRCADAGLDDSGTKADLVGRLLNQASNEDSSPPDAGDAPERVVATDADDAK
LEDADVDAVETDGSGDHDDLLTHLRENPSDAAGWERCARLALATTIPSARPLFDAITEQF
PRSSLAWCWYVDAELSKNDAGTPDDEAIRAIFGKCLIPCPSALLWRRYASYMASTNDVTT
EEGVNTMKSVYEYSVDVVGEDADAGDLWMDYCQFLRSTEATLIVTDVAVEQAPSARDMIV
RRTYQKAISVPMHKLDAVYKVYEAFELEKNKALARALLQEIAPKLLLTRTALGKRKKVLA
DVSGRYALLAASPTACAAQWAEIIDFEKSNVQKLEGATPNEPSPQLYARVKHAYELAGLS
LGETPEFWLEYAHWHESENRSDEAVEVLQRAREALPYCTLITFASADIEETRGDADACRA
IYESIMMPSDIILTYCEYVRASRRVGDQDSSRKAFMRARKAPGATWEIYANSAMIEWQYD
KSDKPARNIFELGLKKFLTSPDYVERYAEFLIGVNDVANARVLFERSLSESPSMKIWDMF
VDFERSHGTVDTILDAEARRNAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaaggctgtcgatctcaagaagcgctgcgccgacgctgggctcgacgatagc
ggcacgaaagccgatctcgtgggaagattactcaatcaagcgtcaaacgaagattcttcg
cccccggacgccggcgatgcgcccgaacgcgtcgtcgcgacggacgccgacgacgcaaag
ttagaagatgcggacgtggatgcggtcgaaaccgacgggagcggcgatcacgatgatttg
ctgacgcatttaagagagaatccgtcagacgccgccgggtgggaacggtgcgcgagactg
gcgttggcgacgacgattccgagcgctcgaccgctgttcgacgccatcaccgaacagttc
cctcgatcatcgttggcgtggtgctggtacgtcgacgcggagctttcgaagaacgatgcg
gggacgccggacgacgaagcgatccgcgccattttcgggaagtgcttgataccgtgcccg
agcgcgttgctctggcgaagatacgcgtcgtacatggcgagcacgaacgatgtgacgaca
gaagagggggtgaacacaatgaaatcggtgtacgagtactccgtggacgtcgtcggcgag
gacgcggacgctggtgatctttggatggactattgtcagttcttgcgcagcaccgaggcg
acgctgattgtcaccgacgtcgctgtggagcaagcgccgagtgcgagagatatgatcgtt
cgcaggacgtaccagaaggcgatttcagtgccgatgcacaaattagatgcagtttacaag
gtttacgaagcgtttgagcttgagaagaacaaggcgctcgcgagggcgttgttgcaggaa
atagcgccaaagttgttgctcacacgcacggcgctcggtaagaggaagaaggtgctcgcc
gacgtcagtggacgatacgcgcttcttgcggcatcacccacggcgtgcgcagctcaatgg
gcagagattatcgattttgagaagtcaaacgtgcaaaagcttgaaggtgcaacgccgaat
gaaccgtccccacaactctatgcgcgcgtgaagcacgcctacgaattagcaggtctgtct
ctcggtgagacacctgagttttggctagagtacgcgcactggcacgagagcgagaatcgt
tcagacgaggcggtggaagttttacagcgagcgcgggaggcgttaccgtattgcacgctt
atcacttttgcgtcggcggatatcgaagagactcgcggcgacgccgacgcgtgtagagcc
atctacgagtccataatgatgccctcggatataattctaacgtactgcgaatacgttcgc
gcgtcgcgtcgtgttggagatcaagattcgagtcgaaaagctttcatgcgagcccgtaag
gcgcccggggcgacgtgggaaatttacgcaaactccgcgatgattgaatggcagtacgat
aagagcgataaaccggcgagaaacatctttgagctcgggcttaagaaatttttgacgtcg
ccagactacgtcgagcgttatgccgagttcttgattggcgtgaacgatgttgccaatgcc
cgagttttgtttgaacgttccctgagtgaatcgccgtcgatgaagatttgggatatgttt
gtcgattttgagcgttcgcatggcacagtggatacgattttagatgcggaggcacggcgt
aatgccgcg
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