KEGG   Ostreococcus lucimarinus: OSTLU_42450
Entry
OSTLU_42450       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03420  Nucleotide excision repair
olu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    OSTLU_42450
   03460 Fanconi anemia pathway
    OSTLU_42450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:olu03032]
    OSTLU_42450
   03400 DNA repair and recombination proteins [BR:olu03400]
    OSTLU_42450
DNA replication proteins [BR:olu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    OSTLU_42450
DNA repair and recombination proteins [BR:olu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     OSTLU_42450
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 5003260
NCBI-ProteinID: XP_001419304
JGI: 42450
UniProt: A4S158
LinkDB
Position
8:complement(join(187172..188830,188900..190168))
AA seq 975 aa
MSLVLADASPSEAVVDGADLLPFQREITKELLARDGFCVLAEGLGASAVIAALVAVDDAL
SKTHVLGEPPMVTLIVGASEHAKVSVKERMTALFPRAAPPLEFTADYAGDKRKKFYDAGC
VAFVTTRIASVDLLSGRLDAKRVRGIIVCSAHRTNETSGEGFVVRLFREGNRKGYVRAIS
DRPGDLTRGFNSVERCLKALMLTRVHLWPRFHLRVKDDLDARPPEVIELRQPMSENVLKI
QEAIVSVMDSCMAELKKSRYIDTSDLTLESGLFKSFDLILQRQLDKVWHIAPRRVKQIVY
DLKTLRLLADALLKYDSVTFLKYLQALRASESRESMWMFTEASHAIFEYAKKRVYLLKRK
AAAAQPKGLGAKRPLPPQITETDLIPILEPMPKWTLMEEILDEIDEERRQGGELLAVADS
ETVQGATLIVCKEEHVARQLEYCIRYGTPALMNAHWVDYLFSRGGKNVAAQVTKRQTGWR
GAGRGGGRGSGRGGGRGAAQKPQRVYSKLERIQARMEGREIDEDPGPAKDGKSDENKLLA
AAAAEAKKTLVAAKKAEDADKKMKATKAAKELDIKIEMKAEEDAAASDDEVIVVGDTRTR
STVKRDTDNMYVYAHERKLNLLNRIQPSFVVMYDPDASFIRELEVYQATRPDVPVKVYFL
VYDTSLEEQKYLSSIKRESAAFENLIRTKQHMAVPAEQEGWTDSENPLPLSLPSSTARHR
IEESQEASTRKGGRSLTIRSSLEVIVDMREFMSALPCVLHSAGFKVRPTTLEVGDYILSP
DMCVERKAIPDLIQSFASGRLIAQVEAMCKHYKTPILLIEFDGSKAFALHAEADLPRFVG
QQHLITKICMLITRFRKLRLIWSRSMHMTAEIFAELKRLEPEPSLETAQRIGVPDADGDV
HKLVKDNLNDAAVDLLRRLPGITDGNYRRVIARVESIEKMCDLREDELADILGDARQAKT
LHTFLHAPFPKEFMF
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgtccctcgtcctcgccgacgcgagtccgagcgaagcggtcgtcgacggggccgacctt
ttgccgttccagcgcgagatcaccaaggaactgctcgcgcgcgatggtttttgcgttctc
gccgaaggactcggtgcgagcgcagtcatcgccgcgctcgtcgccgtcgacgacgcgctg
tctaagacgcacgttctaggcgaaccacccatggtgacgctcatcgtcggtgcgagtgag
cacgcgaaagtgagcgtgaaggagcgtatgacggcgctgtttccgcgcgcggcgccgccg
ctggagttcaccgccgactacgcgggcgacaagaggaaaaagttttacgacgcgggatgc
gtggcgttcgtgacgactcgaatcgcgagcgtggatttgttgagtgggaggctggacgcg
aagcgagtgcgagggatcatagtgtgctcggcgcataggacgaacgagacgtcgggggag
gggttcgtcgtgcggttgtttagagaggggaataggaaaggatacgtgcgggcgatcagc
gatcgccctggggatttgacgcgcggctttaatagcgtggaacgatgtttgaaggcgctg
atgctcacgcgcgtgcatctgtggccgcgatttcatttgcgagtgaaggacgatttagac
gcgcgtccgccagaggtgatcgaattgagacagccgatgagcgagaacgtgttgaagatt
caagaagcgatcgtcagcgtcatggattcgtgcatggctgagttgaagaaaagtcgctac
atcgacacgagcgatttaacgctcgagagtgggttgttcaagagcttcgatttgattttg
cagcgacaactcgacaaggtgtggcacatcgcgccgagacgagtgaaacagatcgtgtac
gatttaaagacgctccgcttactcgcagatgcgttgctgaagtacgattcagtcacgttt
ttgaagtacttgcaggcgttgcgagcgagtgagtcacgtgagagcatgtggatgttcaca
gaggcctcgcacgcgattttcgagtacgcgaaaaagcgagtttacctgctcaagcgtaaa
gccgcggcggcgcaaccgaaaggcttgggcgcaaagcgaccgcttccaccacaaatcaca
gagacggacttgattccgattttagaacccatgccaaaatggacgctcatggaagagatt
ttagatgaaatagacgaagaacgtcggcaaggcggagagctcctcgccgtggcggactcc
gaaacggtccaaggagcgacgttgattgtgtgtaaagaagagcacgtggcgcggcaactg
gagtactgcattcgttacggaacgccggcgctgatgaatgcgcattgggtcgattacttg
tttagccggggcgggaagaacgtggcggcgcaagtgacgaagcgacagacgggatggcgc
ggtgccgggcgcggtggtggccgtggtagtggccgtggtggtgggcgcggtgcggcgcag
aagcctcagcgtgtgtattcaaaactcgagcgcattcaggcgagaatggagggtcgagaa
atcgacgaagatccggggccggcgaaagatgggaaatctgacgagaacaaactcttagcg
gcggccgcagcggaggcgaagaagaccctagtcgctgcgaagaaggccgaagacgcggat
aagaagatgaaggctacgaaggcggcgaaagagttagatatcaaaatagaaatgaaagcg
gaagaggacgcggcggctagcgacgacgaagtcatcgtagtcggcgatacgcgcacgcgc
tcgaccgttaagcgcgataccgataacatgtacgtgtacgcgcacgagcgcaaattgaac
ctgctgaaccgcattcagccttcgttcgtggtgatgtatgatccagacgcgtcattcatc
cgtgaactcgaagtctatcaggcgacgcgcccggacgtcccggtcaaggtgtactttttg
gtgtacgacacgtcattagaggagcaaaagtatctcagtagcatcaaacgcgagagtgcg
gcgttcgaaaacctcatacgcacgaagcagcatatggctgttcccgctgaacaagagggt
tggaccgattcagagaatccgttgccgttgtcgttgccgagctcgaccgctcgacatcga
atcgaggagtcgcaagaggcgagtacgcgtaaaggaggcagatcgctcactattcgttcg
tctctcgaagtcatagtggatatgcgtgagttcatgtctgcgctcccttgcgtgttgcat
tcggcaggtttcaaagtgcgcccgacgacgctagaagtgggcgattacatcctctcgccc
gatatgtgcgtcgagcgcaaagccattccagacttgattcagtccttcgcgtctgggcgt
ttgatagcacaagtcgaagcgatgtgcaaacactataagacaccgattctactcatcgag
tttgacggctcaaaagcgttcgctctgcacgcagaagccgaccttcctcgtttcgtcggg
cagcaacatctcatcacgaagatatgtatgctcatcacacgttttcgaaagttgcgtctt
atttggagtcgatcgatgcacatgacggctgaaattttcgcagagttaaaaaggcttgag
cctgaaccctcactcgaaactgcgcagcgaataggcgttcccgatgccgacggtgacgtg
cacaaactcgtaaaggataacctcaacgacgctgccgtcgatttgttgcgcaggctaccg
ggtatcaccgacggcaattaccgacgagtcatcgcacgagttgaaagtatcgaaaagatg
tgcgacctgagagaagacgaactcgcggatatccttggcgacgcacggcaagcgaagacg
ctccacacatttttacacgcgccgtttccgaaagaattcatgttttag

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