Ostreococcus lucimarinus: OSTLU_42647
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Entry
OSTLU_42647 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OSTLU_42647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_42647
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
OSTLU_42647
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
5003140
NCBI-ProteinID:
XP_001419441
JGI:
42647
UniProt:
A4S1X4
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Position
8:complement(626625..627242)
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AA seq
205 aa
AA seq
DB search
MDALGVGSRGVVDVYSLSNYTFGTKRARGEKDATAAERLLRMRAQYEKEGKRRSVGAICM
VSQHRTPHVLLLQITPTSFKLPGGRLRAGEGDVEGLARKMRNKLQPERDDGLEQYEFDIG
DQVATWYRTSYEPQMYPYLPAHITKPKEEYRMFVAHLPEKCYFAVPKNLKLLAVPLFELY
GNPGKYGAEIASIPHLLSRYRLNLE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctcggcgtcgggtcgagaggggtggtggacgtgtactcgctgtcgaattat
acgtttgggacgaaacgggcgcgaggagagaaggacgcgacggcggcggagcgactgttg
cgaatgcgcgcgcaatacgaaaaggaagggaaacggcggagtgtgggggcgatatgcatg
gtgagccaacacaggacgccgcacgtgttgctgttgcagatcacgccgacgagttttaag
ctgccggggggacggttgcgcgcgggcgagggcgacgtcgaggggctggcgcgaaagatg
cgaaacaagctgcaacccgaacgcgacgacgggttggagcagtacgagttcgatatcggt
gatcaggtcgcgacgtggtatcgcacgtcgtatgaaccgcaaatgtatccgtacttgccc
gcgcacatcacgaaaccgaaggaggagtacagaatgttcgtcgcgcacttgccggagaag
tgctacttcgccgtgccgaagaacttaaagctcctcgcggtgccgttgttcgagctgtac
gggaacccgggaaagtacggcgcggaaatcgcgagcatcccgcacttattatctcgctat
cgattaaatctagagtag
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