Ostreococcus lucimarinus: OSTLU_42846
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Entry
OSTLU_42846 CDS
T01029
Name
(RefSeq) predicted protein
KO
K13091
RNA-binding protein 23/39
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_42846
Spliceosome [BR:
olu03041
]
Common components
Common spliceosomal components
General mRNP proteins
OSTLU_42846
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
5003179
NCBI-ProteinID:
XP_001419396
JGI:
42846
UniProt:
A4S1N4
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Position
8:complement(483833..485383)
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AA seq
516 aa
AA seq
DB search
MRASDATRGAAAAAPRASNAKANAKADVEASRRRRRDGEDDYGERSGGEEEENADRARRG
RDDRRAGERRRRSRSREGEGEDRGRRRARRRSRSRSRDRARLSTPEREEERERKRQEREA
DRQRRELEKLDRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAY
VEFADKKFIHPALELTGQELNGQAIAVKTSEAEKNIAWEAEQAQKKKLGASYGQGVPYIA
SAGPCKLRVGGLHLGLSEDDVKAVFEPFGELDFISMIKDDDPGAAGKFASAFVQFKLTQH
AMLALSQLNGLELVGIPIRVSIASQGVQAAASTMAAPVESLGELDEGSGGLRMDSRGRAA
LMARLAGQDKEIEKGFTIDPSTGLPTTADAVKPIDVPGEALPLAAQPITQGVLGPGSPIP
TPCILLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHAFVDKDSQGFVYLKFVDTAS
STRAQQALHARWFAGRKIAAEFQFAEVYDGHFGLKK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagcgacgcgacgcgaggtgcggcggcggcggcgccgcgcgcgtcgaacgcg
aaggcgaacgcgaaggcggacgtcgaggcgagtcggcggcgacgccgcgacggggaggat
gactacggcgagcggtcgggaggggaggaggaggagaacgcggatcgggcgcgacgcgga
cgagacgatcgacgcgcgggcgaacgcaggcgacggtcgcggtcgagggagggcgaaggc
gaagaccgagggcgaaggcgggcgcggagacggtcgagatcgcggtcgcgagaccgcgcg
aggttgtcgacgcccgaacgcgaagaggaacgggagaggaagcgacaagagcgagaggcg
gatcgtcagcgcagagagctggagaagctcgatcgagatacgaggacggtgttcgtgacg
aatttaagcacgaagctcgacgagcgaggcatcttcaagtttttcagtaaagttggaaag
gtgacggacgtgcggatcatttacgataggaacacgccgaagagtaaggggatggcgtac
gttgagttcgccgataagaagttcatacaccccgcgttggagctcaccggacaagagtta
aacgggcaagccatcgcggtgaagactagcgaggcggagaagaacatcgcgtgggaggcg
gagcaggcgcaaaagaagaagctcggggcgagttatggacagggagtgccctacattgcg
tcggcggggccgtgtaagttgcgagtcggtggacttcacctcggcttgagcgaggacgac
gtcaaagccgtgttcgagccgttcggcgagcttgacttcatatctatgatcaaagacgac
gatccgggcgccgcgggcaagtttgcgagcgcgttcgtgcagttcaagctgacacagcac
gccatgctcgcgctatcgcaactgaatgggttagaactcgtcggtattcccattcgcgtt
tccattgcgagccaaggtgtgcaagcagcggcgagcacgatggcggcgccggtcgagtcg
ctcggtgagctcgacgagggtagcggtggtttacgaatggacagtcgtggtcgtgcggca
ctcatggcgcgtctcgccggtcaagacaaagagatagagaagggattcaccatcgatccg
agcactggcttgccgacgacggcggatgcggtgaagccgattgatgtacccggcgaggcg
ttaccgctcgcagcgcaaccaatcacgcaaggggtactcggcccgggttcgccgatccca
acgccgtgcatattgctcaaaaacctgttcaacgccgcggaagaaaccgatccggagtgg
tggttggacatcgccgaggacgtcaagggagagtgcgaaaagtttggcgaaatcacgcac
gccttcgtggataaggatagtcagggattcgtgtatctcaagtttgtcgataccgcttca
agcacgcgcgcgcagcaagcacttcacgcgagatggtttgcaggtagaaagattgcggcc
gagtttcagttcgcggaagtgtacgacggacacttcggactgaaaaaataa
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