Ostreococcus lucimarinus: OSTLU_4304
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Entry
OSTLU_4304 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OSTLU_4304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_4304
Enzymes [BR:
olu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OSTLU_4304
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OSTLU_4304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
5005706
NCBI-ProteinID:
XP_001421769
JGI:
4304
UniProt:
A4S8H4
LinkDB
All DBs
Position
15:complement(join(<289954..290448,290518..>290757))
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AA seq
245 aa
AA seq
DB search
PRWESATDDRRVMREYFNADVSLERLYEEFAAKDGRFRALAAHVDGARMLRQDPSECLFS
FICSSNNHISRIHGMVNKMCNGGEETAAAAEAEKFYAFPSVAQILDGATEEELRALGFGY
RAKFIVGSAAALGEAGDAVGSSPDEFLRALRDETPYVDAHAALMTLPGIGPKVSACVCLF
SLNKHEAIPVDTHVWQFAVEHYMPELRDAKSVTPRVMRSIEVKMKEIFGPYCGWAHNALF
IAELK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ccgcgatgggagagcgcgacggacgatcgaagggtgatgagggaatattttaacgcggac
gtgtcgctggagaggctgtacgaggagtttgcggcgaaggatgggaggtttcgagcgctc
gcggcgcacgtggacggcgctcggatgttaaggcaggatccgagcgagtgcttgtttagt
tttatttgttcgagcaataatcacatctcgaggatacacgggatggtgaataagatgtgt
aacggcggcgaagagaccgcggcggcggccgaggcggagaaattttatgcgtttccgagc
gttgcgcagattcttgacggcgcgacggaggaggaattacgagcgttgggttttggttat
cgcgccaaattcatcgtcggctccgcggcggctttgggggaggcgggcgacgccgtcggc
tcttctccagacgaattcttgcgcgcgcttcgcgacgaaacgccgtacgtcgacgcccac
gccgcgctgatgacgctcccggggatcggtcccaaagtatccgcttgcgtgtgcttgttc
tccctgaacaagcacgaggcgatcccagtggacacgcacgtgtggcaattcgccgtcgag
cactacatgccagaattacgcgacgccaaatccgtcacccctcgcgtcatgcgctcgatc
gaggtcaagatgaaggaaattttcggcccttactgcggctgggcccacaacgctctcttc
atcgccgagctcaag
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