Ostreococcus lucimarinus: OSTLU_43365
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Entry
OSTLU_43365 CDS
T01029
Name
(RefSeq) predicted protein
KO
K07466
replication factor A1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03030
DNA replication
olu03420
Nucleotide excision repair
olu03430
Mismatch repair
olu03440
Homologous recombination
olu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OSTLU_43365
03420 Nucleotide excision repair
OSTLU_43365
03430 Mismatch repair
OSTLU_43365
03440 Homologous recombination
OSTLU_43365
03460 Fanconi anemia pathway
OSTLU_43365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
olu03000
]
OSTLU_43365
03032 DNA replication proteins [BR:
olu03032
]
OSTLU_43365
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_43365
Transcription factors [BR:
olu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
OSTLU_43365
DNA replication proteins [BR:
olu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
OSTLU_43365
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
OSTLU_43365
MMR (mismatch excision repair)
OSTLU_43365
DSBR (double strand breaks repair)
HR (homologous recombination)
OSTLU_43365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
RADX
Motif
Other DBs
NCBI-GeneID:
5005310
NCBI-ProteinID:
XP_001421265
JGI:
43365
UniProt:
A4S7F6
LinkDB
All DBs
Position
14:join(332774..333060,333255..>334914)
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AA seq
649 aa
AA seq
DB search
MPPALTPNAISNILEQTHGSQDFKPIVQVFDLKELKTKPDADDAAKRFRVLASDGGFAAQ
GLFGAELNAMCERGEITKFTVLRLREYIVNDLNGRRILIVMDAEVMDRYDAVIGQPRVWQ
PGTGTNASTGMNAGGMQQQRNAYGGAPAAQVEGYGSGGGNGANLATEPPRASGGGYGGGA
PAAQGQYRRDGGAVARNEQPRSITPIHALNPYQNRWTIRARITTPLELRSYSNAKGEGKV
LGFQVLDADGTEIKCVCFNDTAVRLAGELRQGLVYEISKGAIVTPRDPRYAIYQYEIKLD
NHATFVPCPDAERDIKKMVYKFKKLSELDALNAGDMVDVIGIAYSVGDLTTIMKRDGSET
SKRSVMIRDDSDTSIEFTLWDPHSVEIGGQIESLIASGEKPVIAVKSSRLGEFQGKNMGT
VSSTMVEINPDSSEATRMRVWFDQGGADKTFNSLSGSGGGGGKGSGELLSFSTVKEIGEE
LVAKNEGVAYLSCCGIIKHIKLGAEGNFYPACPLLNGERTCQKKLRKDDSTGEWKCERHA
GEKIEAADWRYMFSMVCMDHSDEYWVSVFGDKGDKIFGISAAEMKEIYDREPERYENMIS
DALFNDYSLRVKVAVDNYTDVPRAKGSLVEIERVNYVDMSKKLIGKIAK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgcgctgacgccgaacgcgatatccaatattctcgaacagacccacggatcg
caggacttcaaacccatcgtccaagtgttcgatctgaaggaattgaaaaccaaacccgac
gccgacgacgccgcgaagcgattccgcgtcctcgcgtccgacggtggattcgcggcgcag
ggattgttcggggcggagttgaacgcgatgtgcgagcgaggggaaattacgaaattcacg
gtgctgcggttgagagagtacatcgtgaacgatctgaacgggagacggattttgatcgtc
atggacgccgaggtgatggatcggtacgacgccgtcatcggacagccgcgggtgtggcag
ccggggactgggacgaacgcgtcgacggggatgaacgcgggggggatgcaacagcaaaga
aacgcgtacggaggagcgccggcggcgcaggtggaaggctacgggtcgggtggagggaac
ggcgcgaatctggcgacggaaccgccgcgcgcgagcggtggcgggtacggtggcggcgcg
ccggcggcgcaggggcagtatcgtcgagatggtggcgcggtggcgcgcaatgagcagccg
aggtccatcacgccgatccatgcgttgaacccgtaccagaaccgttggactattcgcgcg
cgaatcacgactccgttggagttgcgctcgtattcgaatgcgaaaggcgaaggtaaggtg
ctcggctttcaagtgctcgatgccgacggaacggagatcaagtgcgtgtgctttaacgac
accgccgtgcgcctcgcgggggagttacgtcaaggcttggtgtacgaaatttccaaggga
gcaatcgtcacgccgcgcgacccgcggtacgcgatttatcagtacgaaattaagttggat
aaccacgcgacgttcgtgccgtgtccagacgccgaacgcgacatcaagaagatggtatac
aagttcaagaagctttctgaactcgacgcgctcaacgccggagatatggtggatgtcatt
ggcatcgcatactctgtgggtgatttgacgacgatcatgaagcgcgacggttccgaaact
tcgaagcgttctgtgatgattcgcgacgactcggacacatccatcgagttcacgctttgg
gatccgcactcagtcgagattggcgggcaaatcgaaagcttgatcgctagcggcgaaaaa
cccgtcatcgcggtgaagagctctcgattgggcgagttccaaggcaagaacatgggcacc
gtgagcagcacgatggtagaaataaatcccgacagttccgaggcgacgcgcatgcgcgtt
tggtttgatcaaggcggcgccgataaaactttcaactccttgagcggttctggcggtggc
ggcggcaaaggcagtggtgaattgctctcgttctcgactgtgaaagagatcggtgaagaa
ctcgtggctaaaaatgagggcgtggcgtacctgagttgctgcggtatcataaagcacatc
aaactcggcgcggaaggtaacttctatcccgcgtgtccgttgcttaatggtgaacgcacg
tgccaaaagaagctgcgtaaagatgactcgactggtgaatggaagtgcgaacgtcacgcc
ggtgaaaaaatcgaagccgcggattggcgttacatgtttagcatggtttgcatggatcac
agcgatgagtattgggtgagcgttttcggtgacaagggtgacaagattttcgggataagc
gccgctgaaatgaaggaaatctacgaccgtgaaccggagcgatacgaaaacatgatcagt
gacgcactgttcaacgattactctctacgcgttaaggtcgccgttgacaactacaccgac
gtaccccgcgccaagggcagcttggttgaaatcgagcgcgtcaactacgtagacatgagc
aagaagttgatcggcaagattgcaaag
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