Ostreococcus lucimarinus: OSTLU_43635
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Entry
OSTLU_43635 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12855
pre-mRNA-processing factor 6
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_43635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_43635
Spliceosome [BR:
olu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
OSTLU_43635
Complex C
U5 SnRNP specific factors
OSTLU_43635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
TPR_17
TPR_16
Suf
Ldi
Motif
Other DBs
NCBI-GeneID:
5006824
NCBI-ProteinID:
XP_001422607
JGI:
43635
UniProt:
A4SBF4
LinkDB
All DBs
Position
20:join(490158..490316,490449..492262,492425..492995)
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AA seq
847 aa
AA seq
DB search
MSNQASRALRAPVAPFGDAPAPAGYVPGLGRGAAGFTTRSDIGPGQVAAAGDKRDEDGGR
SGDGGEDGLFGRDASTYDDDDAEADEIWAQIDERMDSRRRDARERREREQMEKFRDENPK
IVETFRDLKRGLKDVSYAEWDAIPDIGDYTIKKKKLNVGFMPAPDTLLAKALAEKETVNT
AADAGGEQDLTAVGEGRGTVLGLKLDRLSDSVTGQTTIDPKGYLTDLGSQKITSAAEISD
IKKARLLLKSVINTNPKHGPGWIAAARLEELAGKLQQARVFMQKGCEECPKNEDVWIEAA
RLNTPENAKAILARGVQTLPNSVKIWMQAAQLEIEDERKRRVLRRALENVPNSVRLWKAL
VDLSAEDDAKVLLARATECCPQHVELWLALARLETTENGRKVLNKARETLPREPQIWITA
AKLEEANGNEKMVEKIIARAVKSLKSHGVTIDRESWIKEAEIAEKAEPPSIATCRAIVKA
TIGEGVEEEDKKRTWKADAEECMKRESAETARAIYAHALDSGFSHKKGLWMKAAMLEKRF
GTPDSVDAVLRKAVTFCPNAEILWLMGAKERWLSGDVTRAREILQSAFDANPDSEEIWLA
AFKLEFENGEIDRARMLLAKARERLADCARVWMKSALVEREAGDEQAERKLLDEGIENGN
ASKARIILETARAKNPSNEHLWLAAVRQERESGNIQLAESTIARALQECPTSGLLLAESV
RFAPRPQRKSKSVDALRRCDNDPYIIAAIAILFWADRKLDKARSWWNRAVTIAPDIGDHW
ASYYKFELQTAGEQAAQAVAERCARAAPRHGENWSAMRKRVENWHDPVIEILKKVAAGQD
EMAYATK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaagcgtcgcgcgcgcttcgcgcgccggtggcgccgttcggcgacgcgccc
gcgcccgcgggttacgtcccgggactcggtcgcggcgccgcggggttcacgacgcggagc
gacatcgggccgggacaggtcgcggcggcgggggacaagcgagacgaggacggcgggaga
agcggcgacggcggcgaagacggattgttcggccgggacgcgtcgacgtacgacgacgac
gacgcggaggcggatgagatatgggcgcagatcgatgagaggatggactcgaggcggagg
gacgcgcgagagcggcgggagagggaacagatggaaaagtttagggatgagaatccgaaa
atcgtggagacgtttcgcgacttgaagcgcgggctgaaggacgtgtcgtacgcggagtgg
gacgcgattccggatatcggggactacacgatcaagaagaaaaaactgaacgtggggttc
atgcccgcgcccgatacgctgctggccaaggcgttggcggagaaggagacggtgaacacg
gcggcggacgcgggcggcgagcaagacttgacggcggtgggcgaaggtcgagggacggtt
ttggggttgaagctcgaccgattaagcgatagcgtcacgggtcaaacgacgatcgatccg
aaggggtacttgaccgatttaggctcgcagaagatcacgagcgcggcggagatttctgac
attaaaaaggcgcgtttgctgctcaagagcgtcatcaacaccaaccccaagcacggcccg
gggtggattgcggcggcgcgtttggaggaactcgcgggtaaattacaacaagcgcgagtg
ttcatgcaaaaagggtgcgaggagtgtccgaagaacgaagacgtgtggatcgaggcggcg
cggttgaacacgccggagaacgccaaggcaattttagcgcgcggcgtgcaaacgttgccg
aattcggtgaagatttggatgcaagcggcgcaattagagattgaagatgagcgtaagcgg
cgcgtgttgcggcgagcgttggagaacgtgccgaattctgtgcgattgtggaaggcgctc
gtggacttgagcgccgaggacgacgccaaggtgttgctcgcgcgcgcgacggaatgttgt
ccgcagcacgtcgaactttggctcgcgctggcgcgtttggagaccactgagaacggtcgt
aaggtgctgaacaaggcacgcgaaacattaccgcgcgagcctcagatttggatcaccgcg
gcgaagctcgaggaggcgaatgggaacgaaaaaatggtggagaaaatcatcgcgcgcgcg
gtcaagtcgctcaaatcgcacggcgtcaccatcgatcgcgagagttggatcaaagaagcg
gaaatcgctgaaaaagccgaaccaccgtcgattgcgacgtgtcgggcgatcgtcaaggcg
accataggcgaaggcgtggaggaagaggacaaaaaacgcacttggaaggcggacgcggag
gagtgtatgaagcgcgagagcgccgagaccgcgcgcgcgatttatgcgcacgcgctagat
tcaggattttcgcacaagaagggtttgtggatgaaagcggcgatgttggaaaagcgattc
ggtacgcctgattccgtcgacgccgtcttgcgcaaggcggtgactttttgccccaacgct
gaaatcttgtggctcatgggcgcgaaagagcgctggctcagcggcgacgtcacgcgagcg
cgcgagattttacaatcagccttcgacgccaacccggactcggaagagatttggctcgcg
gctttcaaattggagtttgaaaacggcgaaattgatcgcgcgcgcatgttgctcgccaag
gcgcgagaacgtttggccgactgtgcgcgggtttggatgaaatctgcgcttgtcgagcgc
gaggcgggtgatgaacaagccgaacgcaagcttctcgatgaaggcatcgaaaatgggaac
gcgtccaaggcgagaatcattctcgaaaccgcgcgcgcgaagaatccctccaacgaacac
ttgtggctcgccgccgtacgtcaagagcgcgagagcggaaacatccagctcgccgagagc
acgatcgcgcgtgcactgcaagagtgcccaacgagcggtttgctccttgccgagtccgtg
cgatttgcgcctcgcccgcaaaggaaatcgaaatctgtcgacgcgttgcggcggtgcgac
aacgatccgtacatcatcgccgccatcgccattttgttctgggccgaccgcaaactcgac
aaagcccgaagctggtggaaccgcgcggtgacaatagcacccgacattggtgaccactgg
gcgtcgtattacaaattcgaactccaaaccgcgggcgagcaagccgcccaagccgtcgcc
gagcgttgcgcgcgggccgctcctcgccacggcgagaattggagcgcgatgcgcaagcgc
gtggagaactggcacgatcccgtgattgaaattttgaaaaaagttgccgccgggcaagac
gaaatggcgtacgcgacgaaatag
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