Ostreococcus lucimarinus: OSTLU_43898
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Entry
OSTLU_43898 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
olu03015
mRNA surveillance pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_43898
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_43898
03015 mRNA surveillance pathway
OSTLU_43898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_43898
03041 Spliceosome [BR:
olu03041
]
OSTLU_43898
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
OSTLU_43898
Spliceosome [BR:
olu03041
]
Common components
Common spliceosomal components
Cap binding complex
OSTLU_43898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5006728
NCBI-ProteinID:
XP_001422671
JGI:
43898
UniProt:
A4SAV8
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Position
20:complement(165711..166232)
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AA seq
173 aa
AA seq
DB search
MARLFLDREPLTQYKDRRFNGTLDEYLDRLRASTTLYVGNVSFYTTENQMHALFRSVGVV
RAIVVGLDSARRTPCGFAFVEYETRADAERCVRYLNGTKLDDREIRIDFDWGYEPGREFG
RGKSGGQVRDEYRTYYDAGRGGYGKLLRDELEGMRASAEVGEKRARDDGAEDA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcctgttcctcgaccgcgagccgctgacgcagtacaaagaccgccggttcaac
ggcacgctcgacgagtacctcgaccgcctgcgcgcgtcgacgacgctgtacgtcgggaac
gtgtccttttacacgacggagaatcagatgcacgcgctgtttcgatccgtcggcgtcgtg
cgcgccatcgtcgtcggcctcgacagcgcgcggcgcacgccgtgcggattcgcgttcgtc
gagtacgagacgcgcgcggacgccgagcggtgcgtgcggtacctgaacgggacgaaactg
gacgatcgcgagatcaggatcgacttcgactggggctacgagccgggacgcgagttcgga
cgagggaaatccggtgggcaggtgcgagacgagtacaggacgtactacgacgcggggcgg
ggcgggtacgggaaattgttgcgggacgagctggaggggatgcgggcgagcgcggaggtg
ggggagaagcgcgcgcgcgacgacggcgccgaggacgcgtag
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