KEGG   Ostreococcus lucimarinus: OSTLU_43913
Entry
OSTLU_43913       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_43913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:olu03000]
    OSTLU_43913
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_43913
   04121 Ubiquitin system [BR:olu04121]
    OSTLU_43913
Enzymes [BR:olu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     OSTLU_43913
Transcription factors [BR:olu03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    OSTLU_43913
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     OSTLU_43913
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     OSTLU_43913
Ubiquitin system [BR:olu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    OSTLU_43913
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 zf-RING_4
Other DBs
NCBI-GeneID: 5004290
NCBI-ProteinID: XP_001420385
JGI: 43913
UniProt: A4S557
LinkDB
Position
11:566308..>566949
AA seq 214 aa
MELASKDDAKGRCPACRTEYDEDAISFDAVPEEELAANAQRAKKREGKAGAANANANGTN
GIKAGSGTGANAAQSQSRKHLQNVRVIQRNLVYVVGLSARCCKEEVLRKNDFFGKYGKIL
KLQVSVNRNGSSSYAGRNADDTGSAYVTFYEENDAMQCIQHIDGTPLDGRILRACFGTTK
YCNAFLKYQPCNNPDCLYLHDIGRDNDSFTKEEM
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaattggcgtccaaagacgacgccaaggggcggtgcccggcgtgcaggacggaatac
gacgaggacgccatctcgttcgacgcggtgccggaggaggagctggcggcgaacgcgcaa
agggcgaagaagcgagagggtaaggcgggcgcggcgaacgcgaacgcgaacggaacgaac
ggaatcaaggcggggagcgggacgggagcgaacgcggcgcagtcgcagtcgaggaaacac
ttgcaaaacgtgcgagtgatacagcgtaatttagtctacgtcgtggggttgagcgcgagg
tgttgcaaggaggaagtgttgaggaagaatgacttcttcggcaagtacgggaaaatcctt
aaactgcaagtgtcggtgaatcgaaacgggagttcgtcgtacgcggggaggaacgcggat
gacaccgggagcgcgtacgtgacgttttacgaagaaaacgacgcgatgcagtgcattcaa
cacattgacgggacgccgctcgacgggaggattttacgcgcgtgcttcgggacgacaaag
tattgcaacgcgtttctgaagtatcagccgtgcaacaatccggattgcctgtacttgcac
gacataggacgagataacgattcattcaccaaggaagagatg

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