Ostreococcus lucimarinus: OSTLU_49593
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Entry
OSTLU_49593 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03265
peptide chain release factor subunit 1
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OSTLU_49593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_49593
03012 Translation factors [BR:
olu03012
]
OSTLU_49593
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
OSTLU_49593
Translation factors [BR:
olu03012
]
Eukaryotic type
Release factors
OSTLU_49593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
VWA_2
Motif
Other DBs
NCBI-GeneID:
5001823
NCBI-ProteinID:
XP_001417750
JGI:
49593
UniProt:
A4RXH2
LinkDB
All DBs
Position
5:join(368740..368776,369031..369047,369175..370449)
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AA seq
442 aa
AA seq
DB search
MADQDSNEKEIEIWKMRKLIKKLEDARGNGTSMISLVIPPKGQVNLVQKMLIEEMGTATN
IKSRVNRQSVLDAIGSAQQRLKLYNKVPPNGLVVYCGAVLTESGKERQMKIDFEPFKPIN
TSLYMCDNKFHTAALSDLLQNDQKYGFVVMDGNGTLFGTLCGNHREILQKISVDLPKKHG
RGGQSALRFARLRLEKRQNYLTKVAELTTQHFISNDRPNVAGLVLAGSADFKNKLAEADC
FDSRLQEVTLAVVDVSYGGENGFNQAIELSADTLSSLKFIQEKKLVGKFFDEIAQDTGKY
VFGINDTLTCLEMGAVETLVCWEDLEVARVTLKNSSTGEETIKFLRPEETEGNENDHVRD
ADGNDLEIVESVPLLEWLANEYKKFGCVLELISDKSQEGNQFCRGFGGIGGLLRYQVDLT
AFEVAADANSDDWDSDDSECFI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaagacagcaatgaaaaagaaattgaaatatggaagatgcgcaagctcatc
aagaagctggaagacgcgcgcgggaacgggacgtcgatgatttcgctcgtgatcccgccg
aaagggcaagtgaacctggtgcaaaagatgttgatcgaagagatgggcacggcgacgaac
attaagtctcgagtcaatcgacagtcagtgctcgatgcgatcggttcggcacaacagcgc
ttgaagctgtacaataaagtgccgccgaatgggctcgtcgtgtattgcggcgcggtgttg
acggagagcgggaaggaacggcagatgaagattgattttgaacccttcaaaccgatcaac
acgtcgttatacatgtgtgacaacaagtttcacactgcagcgttgagtgatttgttgcaa
aacgatcagaagtatggtttcgtcgtaatggatggtaacgggacgctcttcggaaccttg
tgcgggaaccatcgcgagattctacaaaagatttccgttgatttaccgaaaaagcacggt
agaggtggtcaatccgcgcttcgtttcgcgcgtctgcgtttagaaaaacgtcaaaactac
cttaccaaggttgctgagctcacgacgcagcatttcatcagtaatgataggcccaacgtc
gccggcttggtgctcgccggttcggcggatttcaagaacaaactcgccgaggcggattgc
ttcgacagtcgccttcaagaagtcaccttggccgtagtcgatgtctcttacggcggtgaa
aacggctttaatcaagcgattgagctctccgcggacacgctttcgtcgctcaagttcatc
caagaaaagaaattggttggcaagtttttcgacgaaatcgcccaagacacgggcaagtac
gtttttggtatcaacgatactttgacgtgcttggaaatgggagcggttgaaactttggtg
tgctgggaagatctcgaggtcgcgcgcgtgaccctgaaaaatagcagcaccggagaggag
acgattaagtttttgcggcccgaagagactgagggcaatgaaaacgaccacgtgcgcgac
gccgatggcaacgatttggagattgtcgaatccgtcccgctgttggagtggctagcaaac
gagtacaagaagtttggttgcgtcttggaactcatctcggataagtcgcaagagggtaac
caattttgccgtggtttcggcggcatcggcggtttgttgagatatcaagtcgatctcacc
gccttcgaagtcgccgccgacgccaactccgacgattgggactccgacgattccgaatgt
ttcatctaa
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