KEGG   Ostreococcus lucimarinus: OSTLU_49732
Entry
OSTLU_49732       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_49732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_49732
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_49732
Enzymes [BR:olu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     OSTLU_49732
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     OSTLU_49732
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     OSTLU_49732
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    OSTLU_49732
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 5002306
NCBI-ProteinID: XP_001418212
JGI: 49732
UniProt: A4RYS0
LinkDB
Position
6:310552..311811
AA seq 419 aa
MGWNERTRRAPPPQPQQNGNWKDTLALPPRDERYRTEDVTATKGNEFEDYFLKRELLMGI
FEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFTIPILEKVDTSKNIIQAVILV
PTRELALQTSQVAKELGKHLGVAVMVTTGGTSLKDDIMRLHQPVHIVVATPGRLVDLASK
SVAKLGQATMLAMDEADKLLSPEFQPVIAQVINFMAKNRQILLYSATFPVTVKDFKDKYL
RKPYVINLMEELTLKGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSVTRVELLAR
KITELGYSCFYIHAKMIQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQSVNVVINFDFP
KNSETYLHRVGRSGRFGHLGIAVNLITYDDRMNLFRIEQELGTEIQQIPSQIDPSKYCR
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgggatggaacgaacgaacgcgcagggcgcccccgccgcagccgcaacaaaacggaaac
tggaaggacacgctcgcgttgccgcctcgagatgagcggtatcgcacggaggatgtcacg
gcgacgaaaggaaatgagtttgaggattattttctcaagagagagctcctgatggggatc
tttgaaaagggttttgagagaccttcgccgattcaggaggagtcgattcccatcgcgctc
acgggacgagacattttggctcgggcaaagaatgggacggggaagacggcggcgtttact
attcccatcctcgagaaggttgataccagtaagaatatcattcaagcggtcatcttggtg
ccgacgcgcgagttggcgctgcaaacgagtcaagtcgcaaaggaactcggaaagcatttg
ggggtcgccgtcatggttaccacaggaggtacttctttgaaggatgatatcatgcgtttg
caccagccggtgcacatcgtcgtcgcgacccctggtcgtctcgtcgatttggcgagtaag
agcgtggctaaattgggccaagctacgatgctcgccatggatgaggccgataagctcctt
tcacccgaattccaacccgtcatcgcccaagtgatcaacttcatggcgaagaaccgacaa
atattgttgtactccgccactttcccggtcacggtgaaggacttcaaggacaagtatttg
cgtaagccttacgttatcaatctcatggaagagctcacgctgaagggtatcacccaatac
tacgccttcgtcgaagaaaagcaaaaggtgcactgcttgaacaccctcttcagcaaactt
caaatcaaccaatccatcattttctgtaacagcgtcactcgcgtagagttgctcgctagg
aaaatcaccgaacttggatattcttgcttctacattcacgccaagatgattcaggcgcac
cgcaaccgcgtcttccacgacttccgcaacggcgcttgccgcaacttggtgtcgtcggat
ctcttcactcgcggtatcgatattcaatccgtcaacgtcgtcatcaacttcgacttcccg
aagaattctgagacgtacttgcacagagtcggtcgatccggccgtttcggtcacctgggc
atcgccgtgaatcttattacttacgacgatcgcatgaatttgttccgcatcgaacaagaa
ctcggaacggagattcaacaaatcccttcccagatcgatccatcaaaatactgccgataa

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