KEGG   Ostreococcus lucimarinus: OSTLU_50969
Entry
OSTLU_50969       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:olu03009]
    OSTLU_50969
   04121 Ubiquitin system [BR:olu04121]
    OSTLU_50969
Ribosome biogenesis [BR:olu03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    OSTLU_50969
Ubiquitin system [BR:olu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     OSTLU_50969
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 PROPPIN WD40_RFWD3 Nbas_N
Other DBs
NCBI-GeneID: 5004775
NCBI-ProteinID: XP_001420817
JGI: 50969
UniProt: A4S5R6
LinkDB
Position
12:complement(325759..327129)
AA seq 456 aa
MKIKTISRVEEDYTRERKSDALRVHRNLAPELRPMGRATEYKRALNATKLDKVFAKPFAG
QMSGHADGVLCMAKSPASLTELVSGAADGEIRVWDVPSLKTVRVLKGHRGACRGVSASND
GGAVVSCGDDATIRLWTMPKAGMGEMNDPTRKIPVLETSEMYVESNGFRDCDAHWGKKEF
ATAGANVQVWSMERSHALHTFEWGSDTVLSVRYNPVETDIFASCGSDRSIALYDVRMQTP
LKKIIMQTKSTKLCWNPMEAFNFTVANEDTNLYSYDMRKLDIATCVHKDFVSAVMDIDYS
PTGREFVAGSYDRTVRMFDYNAGHSKDCYHTKRMQRVFCTRFSMDGSYVFSASDDMNVRC
WKADASAQMGTLSAREKRKHAYNASLKDRFKHMPEIRRIANHHHVPKAIHKQTKLRRTMQ
EAETRKAKRRVAHAAPGAEKKEFKPARKKKILAEVE
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaagataaaaaccatctcgcgcgtcgaggaggactacacgcgcgagcgaaagtcggac
gcgctcagggtgcatcgaaatctcgcgcccgagctgcggccgatgggacgggcgacggag
tacaagcgcgcgctgaacgcgacgaagctggacaaggtgttcgcgaagccgttcgcggga
cagatgagcggacacgcggacggcgtgctgtgcatggcgaagtcgccggcgtcgctgacg
gaattggtgagcggcgcggcggatggagagatacgagtgtgggacgtgccgagcctgaag
acggtgcgggtgctgaagggacatcgaggggcgtgccgaggcgtgagcgcgtcgaacgac
ggcggcgcggtggtgtcgtgcggcgacgacgcgacgattcggttgtggacgatgccgaag
gcgggaatgggggagatgaacgatccgacgcggaagattccggtgttggagacgtcggag
atgtacgtcgagagcaacggttttagggactgcgacgcgcactgggggaaaaaggagttc
gccaccgcgggggcgaacgtgcaggtgtggagcatggaacggagtcatgcgctgcatacg
ttcgagtggggttccgatacggtgctttcagtgcgatataatccggtggagacggatatt
tttgcgtcgtgtgggtcggatcgatccatcgcgttgtacgacgttcgaatgcagacgccg
ttgaagaagatcatcatgcagacaaagtcgaccaaactgtgctggaatccgatggaggcg
tttaatttcaccgttgccaacgaggataccaacttatactcgtacgacatgcgaaagctg
gatatcgcgacgtgcgttcataaggatttcgtgagcgccgtgatggatatcgattactcg
cccacgggtcgggaattcgtggcggggagttatgacagaaccgtgcgcatgtttgattac
aacgctggacactctaaagattgctaccacaccaaacgcatgcagcgcgtgttctgtacg
cgcttttcgatggatggttcgtacgtcttcagcgcctcggacgacatgaacgtgaggtgt
tggaaggcggacgcgagcgcgcaaatgggcacgctctcggctcgtgaaaagcgcaagcac
gcgtataacgcgtctttaaaggaccgttttaagcacatgcccgaaatcaggcgcattgcg
aatcaccatcacgtacccaaggctattcacaagcaaaccaagttgcggcggacgatgcaa
gaagccgagactcgcaaggcgaaacgtcgcgtcgcgcacgccgcgcctggcgcggagaag
aaggaattcaaacccgcgcgcaaaaagaagatcctcgcagaagtggagtag

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