Ostreococcus lucimarinus: OSTLU_50969
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Entry
OSTLU_50969 CDS
T01029
Name
(RefSeq) predicted protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_50969
04121 Ubiquitin system [BR:
olu04121
]
OSTLU_50969
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
90S particles
Other 90S particles
OSTLU_50969
Ubiquitin system [BR:
olu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
OSTLU_50969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
PROPPIN
WD40_RFWD3
Nbas_N
Motif
Other DBs
NCBI-GeneID:
5004775
NCBI-ProteinID:
XP_001420817
JGI:
50969
UniProt:
A4S5R6
LinkDB
All DBs
Position
12:complement(325759..327129)
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AA seq
456 aa
AA seq
DB search
MKIKTISRVEEDYTRERKSDALRVHRNLAPELRPMGRATEYKRALNATKLDKVFAKPFAG
QMSGHADGVLCMAKSPASLTELVSGAADGEIRVWDVPSLKTVRVLKGHRGACRGVSASND
GGAVVSCGDDATIRLWTMPKAGMGEMNDPTRKIPVLETSEMYVESNGFRDCDAHWGKKEF
ATAGANVQVWSMERSHALHTFEWGSDTVLSVRYNPVETDIFASCGSDRSIALYDVRMQTP
LKKIIMQTKSTKLCWNPMEAFNFTVANEDTNLYSYDMRKLDIATCVHKDFVSAVMDIDYS
PTGREFVAGSYDRTVRMFDYNAGHSKDCYHTKRMQRVFCTRFSMDGSYVFSASDDMNVRC
WKADASAQMGTLSAREKRKHAYNASLKDRFKHMPEIRRIANHHHVPKAIHKQTKLRRTMQ
EAETRKAKRRVAHAAPGAEKKEFKPARKKKILAEVE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaaaaccatctcgcgcgtcgaggaggactacacgcgcgagcgaaagtcggac
gcgctcagggtgcatcgaaatctcgcgcccgagctgcggccgatgggacgggcgacggag
tacaagcgcgcgctgaacgcgacgaagctggacaaggtgttcgcgaagccgttcgcggga
cagatgagcggacacgcggacggcgtgctgtgcatggcgaagtcgccggcgtcgctgacg
gaattggtgagcggcgcggcggatggagagatacgagtgtgggacgtgccgagcctgaag
acggtgcgggtgctgaagggacatcgaggggcgtgccgaggcgtgagcgcgtcgaacgac
ggcggcgcggtggtgtcgtgcggcgacgacgcgacgattcggttgtggacgatgccgaag
gcgggaatgggggagatgaacgatccgacgcggaagattccggtgttggagacgtcggag
atgtacgtcgagagcaacggttttagggactgcgacgcgcactgggggaaaaaggagttc
gccaccgcgggggcgaacgtgcaggtgtggagcatggaacggagtcatgcgctgcatacg
ttcgagtggggttccgatacggtgctttcagtgcgatataatccggtggagacggatatt
tttgcgtcgtgtgggtcggatcgatccatcgcgttgtacgacgttcgaatgcagacgccg
ttgaagaagatcatcatgcagacaaagtcgaccaaactgtgctggaatccgatggaggcg
tttaatttcaccgttgccaacgaggataccaacttatactcgtacgacatgcgaaagctg
gatatcgcgacgtgcgttcataaggatttcgtgagcgccgtgatggatatcgattactcg
cccacgggtcgggaattcgtggcggggagttatgacagaaccgtgcgcatgtttgattac
aacgctggacactctaaagattgctaccacaccaaacgcatgcagcgcgtgttctgtacg
cgcttttcgatggatggttcgtacgtcttcagcgcctcggacgacatgaacgtgaggtgt
tggaaggcggacgcgagcgcgcaaatgggcacgctctcggctcgtgaaaagcgcaagcac
gcgtataacgcgtctttaaaggaccgttttaagcacatgcccgaaatcaggcgcattgcg
aatcaccatcacgtacccaaggctattcacaagcaaaccaagttgcggcggacgatgcaa
gaagccgagactcgcaaggcgaaacgtcgcgtcgcgcacgccgcgcctggcgcggagaag
aaggaattcaaacccgcgcgcaaaaagaagatcctcgcagaagtggagtag
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integrated database retrieval system