KEGG   Ostreococcus lucimarinus: OSTLU_51236
Entry
OSTLU_51236       CDS       T01029                                 
Symbol
GTB3501
Name
(RefSeq) predicted protein
  KO
K11292  transcription elongation factor SPT6
Organism
olu  Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:olu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_51236 (GTB3501)
   03036 Chromosome and associated proteins [BR:olu03036]
    OSTLU_51236 (GTB3501)
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     OSTLU_51236 (GTB3501)
Chromosome and associated proteins [BR:olu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     OSTLU_51236 (GTB3501)
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF Spt6_S1 HHH_3 HTH_44 Tex_central_region HHH_9 MC_hydratase
Other DBs
NCBI-GeneID: 5005071
NCBI-ProteinID: XP_001420894
JGI: 51236
UniProt: A4S671
LinkDB
Position
13:join(64632..65028,65170..68510)
AA seq 1245 aa
MFAARNRTGGAKEDVVEELSEDEESDGDELDTFIEKDGATEEDYEQAKAASDARKAAKAA
RKSAGRKSSGGETKDWASQTFEPSVIKEQMLTAKDDAIRAQDLPERQQLKPRPAHAPTDW
GMEAMWIFDRIMEEEITRCIALLLTLTFDHHLEIPYIVSQRRDDLLPLLRGRAEEARPAL
TEDGDNYQRLLRRFDVIDAIMEWDERYVKLELRKARIASALEQAANEKGESEQGHVARQC
MELVRVAYLDKHVDDAEAKANLFFASLDANSKLRRPGRKTQYDAHVKRGIRDLVNMSGPT
AEAFGEAIKSGIPSELMANLTPEDVAKVYFDQGYANSDEVMQAFVNVAATEIGAESEVRK
WFRDEFLGHATITTQPTPEGTDIIDPWHPIAPVKRLLKMPVYILQGEQFAQILEGKRRGL
LKVDIGFGDERLTSVIERMEKAYLSESMSDLASTWNEVRRRVIRAALEEHLLPTFSRETA
SQLALDARDALNRACADGAWNYICHAPWRPANTEDQDIEVRVVAAVSGSPATFVALDSAG
ELVDFIQCHTLGRNIGGPGNVGGAQMMNQQDEIQALMDFIVQHRPHVCCVGASGMDSKRV
KESLNLVVGRIIEEQPRAIPEEVSEIAVHFVDDSVAKLCENAKETKAEMPEQQPSVLRAV
ALGRGLLNPAAVVASLVSGGEVASLRMCPLQDSMLSKDDRVAIVERQLINLVNQVGVDVN
MASAHPWCSVLLRYVGGLGPRKATLVINAVRTTEGGVVDSREDLKSALGEVVFRNAASFL
RITEADMLDSTRCHPERYEQAMAIVVNALELEANLAAMDKYERERILQKVFDPKTWEQKV
APLILEEYAEYLESEGAGKSLEALREIRIEFRHPFEELRPPWMPLTAEDEFALLTGETMH
TLSAGKLIQCTVKKIEGPRDGRGARAVCTLDSGLTGYVEKYDVSDDQSFSRIEEKVALGQ
VITARVKPDGVDVHNFSVQLACSSSALHPDETLQWEQHLHYTEANGYYSMVKQPGEVRLK
KQKSKKDMQKRTFVPRNIDHPNFQNVSWAEAVERLDTADIGEVIIRPSGRGTKNIDCSIK
VYDGVVSNINIKETKKDSGVGNLGLGTPLIIDDEEYEDLDEVMARHIEPIVSNVKHMLKH
RKFMRGSAEDIDNALKQQLARNPGIRPYALGVVEQRVNKGMVLFCISFIMSSSGRVHHEY
IKVIPAGFYYRKMEFPSVDRMLAYFKVNCSKPPPGARDMDNGGWN
NT seq 3738 nt   +upstreamnt  +downstreamnt
atgttcgccgctcgtaatcgcactggtggcgccaaagaagacgtcgtggaagaattgagt
gaggacgaagagagtgatggcgacgaattggacacgtttatcgaaaaggacggagccacc
gaggaagactacgaacaggccaaggccgcgagtgatgcgcgaaaagcggccaaggcggcg
agaaagagtgcagggcgaaagtcatcgggcggcgaaaccaaggattgggcatctcaaacc
ttcgaaccgtccgtcatcaaggaacagatgttgactgcgaaggatgacgcgattcgtgcg
caagatttaccagagcgtcagcaactcaagccacgtcccgcgcacgcgccgacggattgg
ggcatggaagcgatgtggatttttgatcgcatcatggaagaggaaatcacgcgatgcatc
gcgttattactcactctcacttttgaccaccacttggagattccgtacatcgtctcgcaa
cgtcgcgatgatttgctgcctctgttgcgagggcgcgccgaggaagcgcgtccggcgctg
actgaggatggcgacaactaccaacgacttctgagacgtttcgatgtcatcgatgccata
atggaatgggacgaacgatacgtgaaactggaacttcgcaaggcgagaatcgcgtcggcg
cttgaacaagccgcgaacgagaagggtgaaagcgagcaaggccacgtcgcacgccagtgc
atggaattggtgcgagtcgcgtacttggataagcacgtcgacgatgccgaagccaaggca
aacttgttctttgcttcactcgatgcaaactcaaagcttcgtcgaccgggtcgcaagacg
caatacgacgcgcacgtcaagcgaggcattcgcgacctcgtcaacatgtctggccccacc
gcggaagctttcggcgaagccatcaagagtggaatccccagcgaactcatggcaaacttg
acgccagaagatgttgccaaggtgtactttgaccaagggtatgcgaacagcgatgaagtg
atgcaggcatttgtgaacgtggcggcgacggagattggcgcagagtccgaagtgcgcaaa
tggttccgggatgaatttttgggccatgccaccatcacgacgcagcctacgccggaaggc
acggatatcatcgatccatggcatccaattgctccggtgaagcgcttattgaagatgccc
gtgtacattctccaaggtgaacaattcgcgcagattctcgaaggcaagcgtcgagggcta
ctcaaggtcgacattggtttcggcgacgagcgcttgaccagcgtgattgagcgcatggaa
aaagcgtacttgagtgaaagcatgagtgatctcgcgtcgacttggaacgaagtacgtcgc
agagtgattcgggccgcgctcgaagagcacctacttccgacgttttcgcgcgagacggcg
agtcagcttgcgctagatgcaagagacgcattgaatcgcgcgtgcgctgacggcgcatgg
aactacatttgtcacgccccttggcgtccggcgaacacggaagaccaagatatcgaagtg
cgcgtcgtcgccgccgtctctggttcgcccgccacattcgtcgcgctcgattcagccggc
gagcttgtcgacttcattcaatgtcataccctcgggcgcaacatcggcgggcccggaaac
gtcggtggcgcgcaaatgatgaatcaacaggatgagattcaagcgctcatggattttatc
gttcaacaccgtcctcacgtgtgttgcgtcggcgcgagcggtatggattcaaagcgcgtg
aaagagtcgctcaaccttgtcgtcggtcgcatcatcgaagagcaaccgcgcgcgattcca
gaagaagtttccgaaattgcagttcactttgtggacgattctgtcgcgaaattgtgcgaa
aacgcgaaagagaccaaggcagagatgcccgagcagcagccgtctgtgttgcgcgccgtg
gcgttgggtagaggtctgctgaaccccgccgccgtggtggcttctctcgtgagcggtggc
gaagtcgcttcgttgagaatgtgtccgctacaagattcgatgctgagcaaagacgatcgc
gtcgccatcgtcgaacgccagctcataaaccttgtgaaccaagtcggcgtcgacgtcaac
atggctagcgcgcatccatggtgcagcgtgttgcttcgttacgtcggtggtctcggccct
cgcaaggcaaccttagtgataaacgctgtgcgcacgaccgaaggtggcgtcgttgactcg
cgagaagatttgaaatcggctttgggcgaggttgtctttaggaatgcggcgagcttcttg
cgaatcaccgaggcggacatgcttgattccacgcgttgccaccccgagcgttacgagcaa
gcgatggcgatcgtagtgaatgctttagaactcgaggccaaccttgcggcgatggataag
tacgaacgcgagcgtatcttacaaaaagtgttcgatccgaaaacgtgggagcaaaaggtg
gcgccgctcatcctcgaagagtatgccgagtatttggagtcggaaggcgcgggtaaatct
ttggaggcacttcgcgagattcgcatagagttccgtcatccatttgaggagcttcgtccg
ccgtggatgccactcaccgctgaagacgaattcgctttacttaccggagaaaccatgcac
acgctgagcgcgggtaaactcatccagtgtacggtgaagaagattgaaggtcctcgtgat
ggccgaggcgcacgcgccgtctgtacactcgacagtggcctcactggttacgtcgaaaag
tacgacgtgagcgacgatcaaagcttcagccgcatcgaagaaaaagtcgccctcggtcaa
gtcatcacggcgcgcgtcaagccggacggcgtcgacgtgcacaacttttccgtccaactc
gcgtgcagttcttcggcgctgcatcccgatgagacgctccagtgggagcaacacttgcat
tacacggaagcaaacggttactacagcatggtgaagcagccgggcgaggtgcgattgaag
aagcaaaagtcgaagaaggatatgcaaaagagaaccttcgtgccgcgtaacatcgatcac
cccaacttccaaaacgtcagttgggcagaagccgtggaacgactcgataccgcggacatc
ggagaagtcatcattcgtccgagtggaagaggcacgaaaaacatcgattgctctatcaaa
gtgtacgacggcgttgtctctaacatcaacatcaaagagacaaagaaggactctggcgtt
ggcaacctcggtctcggtactccgctcatcatcgacgacgaagagtacgaagacttggat
gaagtcatggcgagacatatcgaaccgatcgtgtccaacgtcaagcatatgctcaagcac
cgcaagtttatgcgcggatcggcggaggacatcgacaacgccctgaaacagcaacttgcc
cgtaacccgggtatccgcccgtacgccctcggcgtagtcgagcagcgagtgaacaaaggc
atggtgttgttctgcatctcattcatcatgagttccagtggtcgtgtgcaccatgagtac
attaaggtcatccccgcgggcttctactaccgcaagatggagttcccgtccgtcgatcgt
atgttggcctacttcaaagtcaactgctccaagccgcccccgggcgcgcgcgatatggac
aacggcggatggaactaa

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