Ostreococcus lucimarinus: OSTLU_5662
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Entry
OSTLU_5662 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_5662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_5662
Enzymes [BR:
olu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
OSTLU_5662
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OSTLU_5662
mRNA degradation factors
5'-3' decay
Decapping complex
OSTLU_5662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Nudt16-like
BACOVA_00961-like
Motif
Other DBs
NCBI-GeneID:
5003217
NCBI-ProteinID:
XP_001419159
JGI:
5662
UniProt:
A4S1J6
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All DBs
Position
8:<426882..>427796
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AA seq
305 aa
AA seq
DB search
EIYLELAARFVLNAPPSEIEDFNRLMFLIEQAHWYYIDFTCEQDASLSASMGLNEFAKGM
ISSVETLKSRIPGFKNNFEKFKSYKFAIPTCGAVLLNPTMDKCLMVRGWGSQNKSLGFPK
GKMDANETEAECAAREVEEEIGVDIRQFIVEEDKVVFMRKRKPSDKLGQKNTLYLIQGIS
EETKFLTHTRKEISDIVWNPLWIFDQPEEALKKFKNKYGQIYPALRDIMAWVKQNKKKHP
KPRTNQVAAPQSPAAGRAAPMSLEDLENELMSGYDDEPEDDEPAKPHKAFEALTNFKFNK
ARILQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gagatttacctggagctcgccgcgcggttcgtgttgaacgcgccgccgagcgaaatcgag
gatttcaatcgattgatgtttctcatagagcaggcgcactggtattacatcgactttacg
tgcgaacaagacgcgtctttgagcgcgagcatgggtttaaacgagttcgccaaggggatg
atcagcagcgtggagacgctgaagtcgcgaatccctggatttaagaataatttcgagaag
tttaagtcgtataagtttgcaatcccgacgtgcggcgcggtgctgttgaatccgactatg
gataaatgtttgatggttagagggtggggcagtcagaataagtcgttaggatttcccaaa
gggaagatggatgctaatgagaccgaggcagagtgcgcggcgagagaggttgaggaggag
atcggggtggacattcgacagttcatagtggaggaggacaaggtggtgtttatgcgaaag
cggaaaccatccgacaagttgggtcaaaagaacacgctgtacttgattcaggggatctcc
gaagagacaaaattcttgacgcacacgcgaaaagaaatatcggacatcgtgtggaaccct
ctctggatctttgatcagcccgaagaagcgttgaaaaagttcaaaaacaagtatgggcaa
atctacccggctttacgggacatcatggcgtgggtgaagcagaacaagaaaaagcacccg
aagccgcgaacgaatcaagtagcggcgccgcaatcgcccgccgcgggacgcgcggcgccg
atgtctctagaagatctcgaaaacgagctcatgtctggatacgacgacgaacccgaggac
gacgagcccgccaagccgcacaaggcgttcgaggcgttgacgaatttcaagttcaacaaa
gcacgtatccttcag
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