Ostreococcus lucimarinus: OSTLU_6042
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Entry
OSTLU_6042 CDS
T01029
Name
(RefSeq) predicted protein
KO
K08490
syntaxin 5
Organism
olu
Ostreococcus lucimarinus
Pathway
olu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
OSTLU_6042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
olu04131
]
OSTLU_6042
Membrane trafficking [BR:
olu04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
OSTLU_6042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF16
SbsC_spectrin-like
HhH-GPD
DUF724
Syntaxin
KIF21A
Motif
Other DBs
NCBI-GeneID:
5004487
NCBI-ProteinID:
XP_001420374
JGI:
6042
UniProt:
A4S535
LinkDB
All DBs
Position
11:join(<537667..538051,538103..>538503)
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AA seq
262 aa
AA seq
DB search
QMASAIGHGIHRTSLKLERLNQLAKSSSLYDDKSREIAETSAVIKLDIQALNESIVELQG
AAARTRERGEANKSASDHSVTVVDTLKNRLATATKTFKETLTTRQANIKAGEERRAMFGA
SAGPSAFDGASGFGNLQGNANAFVPRPSAPGAGVSGAPMMQTQGQMQLYNQNTAYADSRQ
EALQNVERTITELGGIFQQLATMVSEQGELAIRIDENVDDTLANVDSAQTQLLKYLNTVS
SNRWLILKIFAVLISFFSFFIV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
cagatggcgtcggcgatcgggcacggaattcatcgaacgtcgctgaagctcgaacggctc
aatcagctcgcgaagtcgtcgtcgctgtacgacgataaatcgagagagatagcggagacg
agcgcggtgatcaagctggacattcaagcgctgaatgaatccatagttgaactgcagggc
gcggcggcgaggacgcgagagcgaggggaggcgaataagtcggcgagcgatcacagcgtc
acggtggtggatacgttgaagaatcgactggcgacggcgacgaagacgtttaaggagaca
ttgacgacgagacaggcgaacatcaaggctggagaagaacgaagggcgatgtttggcgcg
agcgcgggaccgagcgcgttcgatggcgcgagcggattcggcaacttgcaggggaacgcg
aacgcgttcgtgccgcgcccgagcgcgccgggcgcaggcgtttctggggcgccgatgatg
caaacgcaaggtcaaatgcagctttacaatcaaaacaccgcctacgccgattcgcggcag
gaggctttgcaaaacgtcgagcgcaccatcaccgagctcggcggcattttccagcagctc
gccaccatggtgagcgaacagggcgaactcgccattcgcatcgacgaaaacgtcgacgac
accctggccaacgtcgacagcgcgcaaacgcagctgttaaagtatttgaacacggtgagc
agcaaccggtggctgattctaaaaatcttcgccgtgttgatctccttctttagcttcttc
atagtc
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