Ostreococcus lucimarinus: OSTLU_785
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Entry
OSTLU_785 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14856
protein SDA1
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_785
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
OSTLU_785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
Sigma70_ner
HEAT_2
DUF3730
CDC45
Motif
Other DBs
NCBI-GeneID:
5005919
NCBI-ProteinID:
XP_001422016
JGI:
785
UniProt:
A4S980
LinkDB
All DBs
Position
16:complement(join(<245610..245972,246168..246722,246916..247215,247481..>248221))
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AA seq
653 aa
AA seq
DB search
PMDLLTLQSACKRDPEGYEEDFALQLRHYEALRALFAMKPSRDHKEFSELVSFIAHVSVV
YKEQTKGFSKGVVEVLERHYAILDPHLRKNLTSALILLRNKGVIGVEVTLPLFFKLFRVK
DKNLRVLMFRHIVSDAKAANKKRTDDKYNRTVQSFLHTAIKDENEATAKKALAVLTEMYR
RNIWTDAKTVNLVVEACKHPSQKILIAALKFFEGQDEAAEAAAEAGDGSDSDDDPSTRES
EIKSRTQGVASSKKKKQKKLKRTIKTMQRKERNADKAIDSRFAAMQLINDPQAFAELLFG
KLQVGHMSYDTKMLCILMMCRIIGMHQLIMLNVYPFLQRYIQPSQLEVTRLLAAAATACH
ELVPPDALAPMLRQLVNQFIHDRARPEIAAVGLNAVREICARCPLVMDEDLLQDLTQYKK
SRDKPVSNAARGLIALFREIAPGLLDKKDRGKAADMSRTLKGFGEAEVVGRIDGVDLLQR
DILKRKREEEAVEMSSEEEYSDEDEDEDEDNEEEEEEDEEEEEDADEEEEDEEAELGGPV
EQERILTDEDFKRIKALKTERQLNAALSKAGAMKASNVATDHIRLMLRKADRASDRRVNP
DSLAATGLKKAHDKASRLATVLAGREDNEYGASSARKQKKTGGSSNKEKDKKK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ccgatggacctgctgacgctgcagagcgcgtgtaagcgcgacccggagggatacgaggag
gatttcgcgctgcagctgcgacactacgaggcgctgcgcgcgctcttcgcgatgaaaccg
tcgcgggatcataaggaattcagtgagttggtgtcgttcatcgcgcacgtgagcgtggtg
tataaggaacagacgaaagggttctcgaaaggggtggtggaggtgctggagcgacattac
gcgatactggacccgcacttgaggaagaatttgacgagcgcgttgattttattgaggaac
aagggcgtgatcggtgtggaggtgacgctgccgttgttttttaaactgttccgggtgaag
gacaaaaatctgcgggtgctgatgttcagacacatcgtgagcgacgcgaaggcggcgaat
aagaagaggacggatgacaagtataatcgcacggtgcagtcgtttttgcacacggcgata
aaggatgagaacgaagccacggcgaagaaggcgctcgcggtgctgacggagatgtaccgg
agaaatatatggaccgacgcgaaaacggtcaacttggtggtggaggcgtgcaagcatcca
tcgcaaaagatcttaatcgccgcgttgaagttttttgaaggtcaagacgaagccgccgag
gcggcagccgaagctggggatgggagcgattccgacgacgatccgtcgactcgcgaatcg
gagattaaatcgcgcacgcagggcgtcgcctcgtctaagaagaagaagcagaagaagcta
aagcggacgattaagactatgcagcgcaaagaacgcaacgcggacaaagcgattgattct
cggttcgccgcgatgcagctcatcaacgatccgcaagcgtttgctgagttgctgttcgga
aagcttcaagtcgggcacatgtcgtacgacacgaagatgctgtgcatcctcatgatgtgt
cgcatcatcggcatgcatcaactcatcatgctcaatgtgtatccatttttgcagcgctat
attcaaccgagtcagctggaggtgacgagacttctcgccgccgccgcgacggcgtgccac
gaactcgtgccgccggacgcgctcgcgccgatgttgcgtcagctcgtcaaccagttcatt
cacgatcgcgcgcgccctgaaattgccgcggttggtttgaacgcggtgcgtgaaatttgt
gcgcgctgtcctttggtgatggatgaagatttacttcaagatttgacgcaatacaaaaaa
tcgcgcgacaagccggtgtcaaacgcagcgcgaggactcatcgctttattccgagaaatt
gcgcccggcctcctcgacaagaaggatcgtgggaaagcggcggatatgtcaagaacgctc
aagggtttcggtgaagctgaagtggtgggtcgcatcgacggcgtcgacttgcttcaacgc
gacattttgaaacgtaaacgcgaagaggaagccgtcgaaatgtcttcagaggaagagtat
tccgacgaagacgaagacgaagacgaagacaacgaagaagaagaggaagaggacgaagaa
gaagaagaagacgcggacgaagaagaagaagacgaggaagccgaactgggtggaccggtg
gagcaagagcgcattctcaccgacgaggatttcaagcgcatcaaggcgctcaaaacggag
cggcaactcaacgccgcgctctccaaggcgggcgcgatgaaggcttcgaacgtcgcgacc
gatcacattcgattaatgcttcgcaaggcggatcgcgcgagtgatcgtcgggtgaaccct
gattcgctcgccgcgacgggcttgaagaaggcgcacgacaaggcgtcgcgtctcgccacc
gtcctcgccggtcgcgaggacaacgagtacggcgcgtcgagcgcgcgcaaacaaaagaag
actggcggttcgagcaacaaggagaaggacaagaagaaa
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