Ostreococcus lucimarinus: OSTLU_8172
Help
Entry
OSTLU_8172 CDS
T01029
Name
(RefSeq) predicted protein
KO
K07573
exosome complex component CSL4
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSTLU_8172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_8172
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
OSTLU_8172
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
OSTLU_8172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
5002992
NCBI-ProteinID:
XP_001418674
JGI:
8172
UniProt:
A4S034
LinkDB
All DBs
Position
7:<336827..>337207
Genome browser
AA seq
127 aa
AA seq
DB search
VVPRGGDVVFGRVTRVLEKAAHVEIAAVNGRAPRGGDFAGVVRRQDARAHAVDSVELERC
FRAGDVVRAKVLSLGDARSFYLTTAGDDLGVVRATHGTSRATMLPIGWTEVQCPVTGEVE
DRKVARV
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
gtggtgccgcgcggcggggacgtcgtgttcggacgcgtgacgcgcgtgctcgagaaggcg
gcgcacgtggagatcgcggcggtgaacggaagggcgccgaggggaggggatttcgcgggc
gtcgtgcgaaggcaagacgcgcgcgcgcacgcggtggactcggtggagctggagaggtgc
ttcagggcgggggacgtcgtcagagcgaaggtgctgtcgctgggcgacgcgcggtcgttt
tatctgacgacggcgggtgacgatttgggggtggtgcgggcgacgcacgggacgtcgcgc
gcgacgatgcttccgatcggttggaccgaggtgcagtgcccggtgacgggggaggttgag
gatagaaaggtggcgagagtg
DBGET
integrated database retrieval system