KEGG   Ostreococcus lucimarinus: OSTLU_8172
Entry
OSTLU_8172        CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K07573  exosome complex component CSL4
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSTLU_8172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olu03019]
    OSTLU_8172
Messenger RNA biogenesis [BR:olu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     OSTLU_8172
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     OSTLU_8172
SSDB
Motif
Pfam: EXOSC1 RRP4_S1
Other DBs
NCBI-GeneID: 5002992
NCBI-ProteinID: XP_001418674
JGI: 8172
UniProt: A4S034
LinkDB
Position
7:<336827..>337207
AA seq 127 aa
VVPRGGDVVFGRVTRVLEKAAHVEIAAVNGRAPRGGDFAGVVRRQDARAHAVDSVELERC
FRAGDVVRAKVLSLGDARSFYLTTAGDDLGVVRATHGTSRATMLPIGWTEVQCPVTGEVE
DRKVARV
NT seq 381 nt   +upstreamnt  +downstreamnt
gtggtgccgcgcggcggggacgtcgtgttcggacgcgtgacgcgcgtgctcgagaaggcg
gcgcacgtggagatcgcggcggtgaacggaagggcgccgaggggaggggatttcgcgggc
gtcgtgcgaaggcaagacgcgcgcgcgcacgcggtggactcggtggagctggagaggtgc
ttcagggcgggggacgtcgtcagagcgaaggtgctgtcgctgggcgacgcgcggtcgttt
tatctgacgacggcgggtgacgatttgggggtggtgcgggcgacgcacgggacgtcgcgc
gcgacgatgcttccgatcggttggaccgaggtgcagtgcccggtgacgggggaggttgag
gatagaaaggtggcgagagtg

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