Ostreococcus lucimarinus: OSTLU_87707
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Entry
OSTLU_87707 CDS
T01029
Symbol
HDA3505
Name
(RefSeq) predicted protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
olu
Ostreococcus lucimarinus
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
olu01009
]
OSTLU_87707 (HDA3505)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_87707 (HDA3505)
04131 Membrane trafficking [BR:
olu04131
]
OSTLU_87707 (HDA3505)
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_87707 (HDA3505)
Enzymes [BR:
olu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
OSTLU_87707 (HDA3505)
Protein phosphatases and associated proteins [BR:
olu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
OSTLU_87707 (HDA3505)
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
OSTLU_87707 (HDA3505)
Membrane trafficking [BR:
olu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
OSTLU_87707 (HDA3505)
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
OSTLU_87707 (HDA3505)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Glyoxalase
DUF748
Motif
Other DBs
NCBI-GeneID:
5002651
NCBI-ProteinID:
XP_001418630
JGI:
87707
UniProt:
A4RZU5
LinkDB
All DBs
Position
7:<176280..177722
Genome browser
AA seq
480 aa
AA seq
DB search
VKARAVALDHARVNVDDVDALVSGLGALGLRASEDKQHPITRVQTPPPLRKHAHARTVSV
SDVDVSAVKLERDEAPAKRKRRVGLLYDDAMEMHEKEGHFEQPARHRVVVNEIKAEKLDL
RCERLEAREATEAELTRAHTKEHVAFVDSAFDVDGEKVQVMTGEDVFGDDIFFTKHTAKG
ARMAAGTVAEACLAVGRGDVDRAFAVVRPPGHHAVCGQAMGFCFFNNAVVGARAVIETKL
CERVLIIDWDVHHGNGIQDIVYEDESVMYVSLHRYGDGFYPGTGAVAEVGKGGTNVNVAW
SEKGLGDADYLAAFDVVIEPVVKSFAPDLIIIAAGFDAADGDPLGGMMVSPTGYMHMTKR
LIEIGTGRVVVALEGGYALRPLATCATATLRALLGDEPKPISSRSRPRKSSIKLCRELAS
LLAEHWPVLESDEYKNSTALIAKRATVVGAAREYPTGRRSKSPANSSSSASTAVGAVCTT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgcgcgccgtcgctctcgaccacgcgcgcgtcaacgtcgacgatgtcgacgcg
ctcgtgtcgggcctcggcgcgctcggcctgcgagcgagcgaggacaaacagcatccgatc
acgcgcgtgcaaacaccgccgccgttgcggaagcacgcgcacgcgcgcacggtgagcgtc
tcggatgtggatgtgtccgcggtgaagctcgagcgcgacgaagcgccggcgaagcgcaag
cgccgcgtggggttgttgtacgacgacgcgatggaaatgcacgaaaaggagggacacttc
gaacagccggcgagacatcgggtcgtcgtgaatgagatcaaggcggagaaactggatttg
agatgcgaacggctggaggcgcgagaggcgacggaggcggagctgacgcgcgcgcacacg
aaggaacacgtggcgttcgtcgattcggcgttcgacgtcgatggagagaaggtacaagtt
atgactggcgaggacgtgttcggcgatgacatcttcttcacgaagcatacggcgaagggg
gcgcgcatggcggcggggacggtcgcggaggcgtgtttggcggtggggcgaggagacgta
gaccgagcgttcgcggtggtgcgaccaccgggacatcacgcggtgtgcggacaagcgatg
ggattttgtttcttcaataacgccgtcgtgggagcacgagcggtgatcgagacaaaactg
tgcgagcgagtcctgataatcgattgggacgtgcaccacggtaacggcatccaggacatc
gtgtacgaagacgagagcgtgatgtacgtatcgttgcatcgatacggcgatggattttac
ccgggcacgggtgctgtagcggaggttggtaaaggcggtacgaatgtgaacgttgcgtgg
tcggagaagggcttgggagacgccgattacttggccgcgtttgacgtcgtcatcgagccc
gtggtgaaatctttcgctccagatttgatcatcatcgccgctggattcgacgccgcggac
ggcgatccactcggaggtatgatggtatcgcccacgggctacatgcacatgacgaagcgt
ttgattgaaatcggtaccgggcgcgtcgtcgtcgctcttgaaggtggttacgcccttcgc
ccgctcgccacgtgcgcgacggcgacgcttcgagcgttactcggcgatgaaccgaagcct
atatcatcgcggtctcgaccgaggaaatcaagcatcaagctctgtcgcgagctcgcgtcg
ctgctcgcagagcactggcccgtgctagagagcgacgagtacaagaattcgacggcgttg
atcgcgaaacgcgccaccgtcgtcggcgccgcgcgagagtaccccaccggtcgccgctcg
aaatcgcccgcaaattcttcctcgtccgcctccactgccgtgggcgccgtctgtacgact
taa
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