Ostreococcus lucimarinus: OSTLU_9203
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Entry
OSTLU_9203 CDS
T01029
Name
(RefSeq) predicted protein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_9203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_9203
03041 Spliceosome [BR:
olu03041
]
OSTLU_9203
03032 DNA replication proteins [BR:
olu03032
]
OSTLU_9203
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
OSTLU_9203
Spliceosome [BR:
olu03041
]
Complex A
U1 snRNP components
Sm proteins
OSTLU_9203
U2 snRNP components
OSTLU_9203
Complex B
U1 snRNP components
OSTLU_9203
U4/U6.U5 tri-snRNP components
OSTLU_9203
Complex C
U2 snRNP components
OSTLU_9203
DNA replication proteins [BR:
olu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
OSTLU_9203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
ADH_N
LSM14
Motif
Other DBs
NCBI-GeneID:
5000898
NCBI-ProteinID:
XP_001416549
JGI:
9203
UniProt:
A4RTS7
LinkDB
All DBs
Position
3:join(<74250..74312,74612..>74833)
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AA seq
95 aa
AA seq
DB search
LGKGVGVPVKLLHESEGHVVTVELKTGETYRGQLVESEDNWNCQMTDVTHVGRDGKESKM
EHVYIRGSKVRMMVIPDMLKHAPMFKRIDPKFDPK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
ctcggcaagggcgtcggcgtgccggtgaagctgctgcacgagagcgagggacacgtcgtg
acggtggagcttaagactggggaaacgtaccgagggcagctcgtggagagcgaggataat
tggaattgtcaaatgacggatgtcacgcacgtcggtcgcgacgggaaggagagtaagatg
gaacacgtgtacattcgtgggtcgaaagtgcgaatgatggtgattccggacatgctgaag
cacgcgccgatgttcaagagaatcgatccgaagtttgatccgaag
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