Ostreococcus lucimarinus: OSTLU_94220
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Entry
OSTLU_94220 CDS
T01029
Name
(RefSeq) predicted protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OSTLU_94220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olu03041
]
OSTLU_94220
Spliceosome [BR:
olu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
OSTLU_94220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
5001447
NCBI-ProteinID:
XP_001417188
JGI:
94220
UniProt:
A4RVQ7
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All DBs
Position
4:join(247222..248181,248269..248490)
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AA seq
393 aa
AA seq
DB search
MDGATTTASGKRAGAIDEGAEALVVECNALTVEVDNEVAVVHQYIKDRYKSKFPELESLV
LHPIDYARVVKAIGNEMDMMGVELDGVLPSATIMVVSVTGSTTSGQPLSESDLEKTLRAC
DRALELDEAKKKMFNYVATRMADTAPNLSAVLGSDIAAQLIGIAGGLHALSKMPACNVQV
LGSKKKATAGMSSASAVRAGDLHAGFIYDCDIIQKKTPPAWRSKAARLIGAKCSLMARVD
AYGESPDGATGKKFAEEIMKKIEKWQEPPPARTAKPLPAPGVEQKKRRGGRRARALKERY
GLTDMRKAANRVNFNEVEEEAAKLIKTDNKGGKSTFASTAGTSGMASSLAFTPVQGIELV
NPNRTASDGPVSGTDSVFSERRGFSNVARQLKR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgcgacgacgacggcgtcgggaaagcgcgcgggggcgatcgacgagggcgcg
gaggcgctcgtggtggagtgcaacgcgctcacggtggaggtggacaacgaagtcgccgtc
gtgcatcagtacattaaagacaggtataagagtaaattcccagagttagagtccttggtg
ctgcatccgatcgattacgcgcgagtggtgaaggcgatcgggaacgagatggacatgatg
ggggtggaattggacggcgtgttgccgtcggcgaccatcatggtggtgagcgtcacggga
tcgacgacgtctggacaaccgctgagcgagagcgatttggagaagactttacgcgcgtgt
gatcgagcgttagagctcgatgaggcgaaaaagaagatgttcaactacgtcgccacgcgc
atggcggacacggcgccaaatttgagcgcagtattgggaagcgacatcgcggcgcagctc
atcggcatcgccggcggcttgcacgctctgtcgaaaatgccggcttgtaacgtccaagtt
ttggggtctaagaagaaggcgaccgcgggcatgtcgagtgcatcggctgtgcgagcggga
gatttgcacgctggcttcatttacgactgcgacattatccaaaagaagacgccgcccgcg
tggcgaagcaaggcggctcgtctgattggcgcaaagtgttcgcttatggcgcgcgtcgat
gcgtacggggagtccccggacggtgccactgggaagaagtttgccgaagaaatcatgaaa
aaaattgaaaagtggcaggagccgcctcccgcgcgaacggcgaaacctttacccgcgcct
ggagtcgagcaaaagaaacgccgaggcggtcgccgcgcgagagcgctcaaggaaagatac
ggtctcacggacatgcgcaaggcggcgaatcgcgtgaatttcaacgaagtcgaagaagag
gcggccaagctcatcaagacggataacaagggcggaaaatccacgtttgctagcacggct
gggacgtccgggatggcatctagcctggctttcacgccggtccaaggaattgaactcgta
aatccgaacagaacggcatcggatggtccagtctctggcaccgacagcgtcttctccgag
cgccgcggcttttcaaacgtcgcgcgacagctcaagcgataa
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