KEGG   Ostreococcus lucimarinus: OSTLU_94390
Entry
OSTLU_94390       CDS       T01029                                 
Name
(RefSeq) predicted protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
olu  Ostreococcus lucimarinus
Pathway
olu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:olu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OSTLU_94390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:olu03021]
    OSTLU_94390
Transcription machinery [BR:olu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     OSTLU_94390
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 5001957
NCBI-ProteinID: XP_001417829
JGI: 94390
UniProt: A4RXX6
LinkDB
Position
5:641145..642701
AA seq 518 aa
MPPKRAHDAPASTIDVRVRFPGERDATRLAIDARAPTVRAAIEALTKARRDVRDALSTSY
AGFEIALSARGTNDDGATLREDAPCAKDEEYVARLTRAYALRATTHPTRKYVVGRFKGER
TPVFSVGERAPVEWQMRHAKSDASGNALVLTGGKKGNKGAYTGTRDAQSASYFVLMSHRD
EATATVREFVAMPCEDWYTFTHNVQRRVFTLEEAEARMEAGKRAVGEAWGRMDRTVDEPG
YSDDESDGDRGEQRDESSDEEDAFKAKKGKKKAIQGVGLDSDDEDDTGKKSGKPARKSQD
EGGEDWEHDEEWDDDEDDVAIPEDEEAPKDPTKTHADSDAEDEGLDEEGLAVKKLLGKQE
KMQAGQFSDSDSDSELEEDFNPDNDDIAAKVVGSFVERSKKLEAEEKAEAAAQPMAKSAS
ASSIGVKRSASDVDTAAPLAKTARVAPPTAPKQSPIQAVIIDVVRKNPDSTTVKLITKTC
RKKGLLNSTAGAEELKEAIKNLLVMKKLRDGSQVLVLK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgccgccgaagcgcgcgcacgacgcgcccgcgtcgacgatcgacgtgcgcgtgcgattc
cccggcgaacgcgacgcgacgcgcctcgccatcgacgcgcgcgcgccgacggtgcgcgcc
gcgatcgaggcgctcacgaaggcgcgtcgggacgtgcgcgacgcgctgtcgacgtcgtac
gccgggtttgagatcgcgctgagcgcgcgaggaacgaacgacgacggcgcgacgctgcgg
gaagacgcgccgtgcgcgaaagacgaagagtacgtcgcgcggttgacgcgagcgtacgcg
ctgcgagcgacgacgcatccgacgcgcaagtacgtcgtgggacgatttaagggagaacgc
acgccggtgttcagcgtgggagagcgcgcgccggtggagtggcagatgcgacacgcgaag
agcgatgcgagtgggaacgcgttggtgctcacgggagggaaaaaggggaacaagggcgcg
tacacggggacgcgagacgcgcagagcgcttcgtactttgtgctcatgtcgcacagggat
gaagcgacggcgacggtgcgagaattcgtggcgatgccgtgtgaggactggtatacgttc
acgcataacgtacagcggcgagtgttcacgctggaagaggcggaggcgaggatggaggcg
gggaaacgcgcggtgggcgaggcgtggggacgcatggatcgaacggtggacgaaccgggg
tactcggacgacgagagcgacggcgatagaggtgagcagagggacgaatcgagcgatgaa
gaggacgcttttaaggcaaagaaagggaagaaaaaggcgattcaaggcgtcggtctcgat
agcgacgacgaagacgacaccgggaagaaatcgggcaagccggcgcgcaaaagtcaggac
gaaggaggcgaggattgggagcacgacgaggagtgggacgacgacgaggatgacgtcgcg
attccagaggacgaagaggcaccgaaagacccgacgaagacgcacgcagacagcgatgcg
gaggacgagggattagatgaagaaggtttagccgtgaaaaagttgctcggcaagcaagaa
aaaatgcaagccggtcagtttagcgattccgactcagactccgaactcgaggaagatttt
aacccggacaacgacgatatcgccgccaaggtcgtcggctctttcgtcgaaagaagcaaa
aaattggaggctgaggaaaaagccgaagcggctgcgcaaccgatggcgaaatccgcgtcg
gcgtcctccatcggcgtcaagcggagcgcgagcgacgtcgacaccgccgcgccactggcc
aagacagcacgcgtcgcgccaccgacggcaccgaaacaatctccgatccaggctgtgatc
atcgacgtcgtgcgcaaaaatcccgacagcaccaccgtcaagctcatcacgaagacgtgt
cgcaagaaaggcttgttgaacagcaccgccggtgccgaggagctcaaggaagcgatcaaa
aacttgctcgtcatgaagaaacttcgcgatggctctcaagtcttagtgttgaaataa

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