Ostreococcus lucimarinus: OSTLU_94390
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Entry
OSTLU_94390 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OSTLU_94390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_94390
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
OSTLU_94390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
5001957
NCBI-ProteinID:
XP_001417829
JGI:
94390
UniProt:
A4RXX6
LinkDB
All DBs
Position
5:641145..642701
Genome browser
AA seq
518 aa
AA seq
DB search
MPPKRAHDAPASTIDVRVRFPGERDATRLAIDARAPTVRAAIEALTKARRDVRDALSTSY
AGFEIALSARGTNDDGATLREDAPCAKDEEYVARLTRAYALRATTHPTRKYVVGRFKGER
TPVFSVGERAPVEWQMRHAKSDASGNALVLTGGKKGNKGAYTGTRDAQSASYFVLMSHRD
EATATVREFVAMPCEDWYTFTHNVQRRVFTLEEAEARMEAGKRAVGEAWGRMDRTVDEPG
YSDDESDGDRGEQRDESSDEEDAFKAKKGKKKAIQGVGLDSDDEDDTGKKSGKPARKSQD
EGGEDWEHDEEWDDDEDDVAIPEDEEAPKDPTKTHADSDAEDEGLDEEGLAVKKLLGKQE
KMQAGQFSDSDSDSELEEDFNPDNDDIAAKVVGSFVERSKKLEAEEKAEAAAQPMAKSAS
ASSIGVKRSASDVDTAAPLAKTARVAPPTAPKQSPIQAVIIDVVRKNPDSTTVKLITKTC
RKKGLLNSTAGAEELKEAIKNLLVMKKLRDGSQVLVLK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagcgcgcgcacgacgcgcccgcgtcgacgatcgacgtgcgcgtgcgattc
cccggcgaacgcgacgcgacgcgcctcgccatcgacgcgcgcgcgccgacggtgcgcgcc
gcgatcgaggcgctcacgaaggcgcgtcgggacgtgcgcgacgcgctgtcgacgtcgtac
gccgggtttgagatcgcgctgagcgcgcgaggaacgaacgacgacggcgcgacgctgcgg
gaagacgcgccgtgcgcgaaagacgaagagtacgtcgcgcggttgacgcgagcgtacgcg
ctgcgagcgacgacgcatccgacgcgcaagtacgtcgtgggacgatttaagggagaacgc
acgccggtgttcagcgtgggagagcgcgcgccggtggagtggcagatgcgacacgcgaag
agcgatgcgagtgggaacgcgttggtgctcacgggagggaaaaaggggaacaagggcgcg
tacacggggacgcgagacgcgcagagcgcttcgtactttgtgctcatgtcgcacagggat
gaagcgacggcgacggtgcgagaattcgtggcgatgccgtgtgaggactggtatacgttc
acgcataacgtacagcggcgagtgttcacgctggaagaggcggaggcgaggatggaggcg
gggaaacgcgcggtgggcgaggcgtggggacgcatggatcgaacggtggacgaaccgggg
tactcggacgacgagagcgacggcgatagaggtgagcagagggacgaatcgagcgatgaa
gaggacgcttttaaggcaaagaaagggaagaaaaaggcgattcaaggcgtcggtctcgat
agcgacgacgaagacgacaccgggaagaaatcgggcaagccggcgcgcaaaagtcaggac
gaaggaggcgaggattgggagcacgacgaggagtgggacgacgacgaggatgacgtcgcg
attccagaggacgaagaggcaccgaaagacccgacgaagacgcacgcagacagcgatgcg
gaggacgagggattagatgaagaaggtttagccgtgaaaaagttgctcggcaagcaagaa
aaaatgcaagccggtcagtttagcgattccgactcagactccgaactcgaggaagatttt
aacccggacaacgacgatatcgccgccaaggtcgtcggctctttcgtcgaaagaagcaaa
aaattggaggctgaggaaaaagccgaagcggctgcgcaaccgatggcgaaatccgcgtcg
gcgtcctccatcggcgtcaagcggagcgcgagcgacgtcgacaccgccgcgccactggcc
aagacagcacgcgtcgcgccaccgacggcaccgaaacaatctccgatccaggctgtgatc
atcgacgtcgtgcgcaaaaatcccgacagcaccaccgtcaagctcatcacgaagacgtgt
cgcaagaaaggcttgttgaacagcaccgccggtgccgaggagctcaaggaagcgatcaaa
aacttgctcgtcatgaagaaacttcgcgatggctctcaagtcttagtgttgaaataa
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