Oleiharenicola sp. Vm1: ACMYLB_05550
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Entry
ACMYLB_05550 CDS
T11510
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
olv Oleiharenicola sp. Vm1
Pathway
olv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
olv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACMYLB_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olv03400
]
ACMYLB_05550
Enzymes [BR:
olv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACMYLB_05550
DNA repair and recombination proteins [BR:
olv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACMYLB_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
HHH
nSTAND3
AAA_28
NAT10_TcmA_helicase
AAA
SLFN-g3_helicase
AAA_29
T2SSE
TrwB_AAD_bind
NTPase_1
NPHP3_N
DEAD
TraI_hel_assoc_N
AAA_16
RsgA_GTPase
PhoH
MobB
UvrD-helicase
AAA_3
AAA_18
AAA_5
TsaE
NACHT
AAA_25
Ploopntkinase3
ABC_tran
ORC-CDC6-like
cobW
AAA_23
Motif
Other DBs
NCBI-ProteinID:
XOM10637
LinkDB
All DBs
Position
complement(1037927..1040254)
Genome browser
AA seq
775 aa
AA seq
DB search
MAAPSANSLTGVLERIIFFNEENHYTIAELRPETAKSAEDRVTIVGPLPGVQCGETLELT
GEWTKHAQHGAQFKVTGFKSELPSSVYGIRKYLGSGLVPGIGKVYANKIVDAFGTDTFRV
LSEESGKLRSVPGIGKVRATAIKAAWDEQKTLREVHIYLQTYGVTTSQCVKIVNKFGTAA
PRVIREEPYRIAREIDGIGFKTADRLAINLGFANDSAPRLDAGLIYALETLQEDGHTAYP
REELVTYTATLLETSAERVEARIDALIAEKSLVAHGTGPSAPAARRPAAQAGRVVPDEPP
SAVQNPKSRIQNSAIQLPVNSRAEQKIADVVRRLGAQPSGLPPIKVDAAVAWAQEKAGFE
FHGLQSAAIKHALTHKFSILTGGPGTGKTTILRALVDILKAKKVRVTLAAPTGRAAQRLA
ETTGGFASTIHRLLKFENGAFTVNESHPLATDFLIVDEASMLDVRLAAALLQAVPNRAHL
LLVGDIDQLPSVGAGNVLKDLIAVSSQLSTLNSHLESPALPVTRLSFVYRQGKESAIVTT
AHAINEGHAQPPPVLSEVDKAQAWSDLNFIAATDAEDCLAKIIALCTQFIPAHFKWFNPI
TDVQVLAPMHKGTVGVGNLNTRLQAALNPHQAGLRAVSGEYRPGDKLIQLRNNYDKGLFN
GDIGRVVSTDLTKGTLIADFDGEQHVFERGEMNEVALAYAISIHKSQGSEYPVVIVPLLK
AHFMMLQRNLVYTAITRGRKKVFLVGEPAAYSMAVRNAESKQRCTHLREKILTSA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcaccctccgccaattccctcaccggcgtcctcgagcgcatcatcttcttcaac
gaggagaatcactacaccatcgcggagctgcgcccggagaccgcgaaatcggccgaggac
cgcgtcaccatcgtcggtccgctcccgggcgtgcagtgcggcgagacgctcgagctgacc
ggcgagtggacgaagcacgcgcagcacggcgcgcagttcaaggtcaccggcttcaagagc
gagctgccctcctccgtctacggcatccgcaaatacctcggcagcggcctcgtcccgggc
atcggcaaggtctacgccaacaagatcgtcgacgcgttcggcaccgacaccttccgcgtc
ctcagcgaggaatcgggcaagctccgctcggttccgggcatcggcaaggtccgcgccacc
gccatcaaggccgcctgggacgagcagaagacgctgcgcgaggtccacatctacctccag
acctacggcgtcacgacctcgcagtgcgtgaagatcgtgaacaagttcggcaccgccgcg
ccgcgggtcatccgcgaggagccctaccgcatcgcgcgcgagatcgacggcatcggcttc
aagaccgccgaccggctcgccatcaacctcggtttcgccaacgactccgccccgcgcctc
gacgccggcctgatctacgccctggaaacgctgcaggaggacggccacaccgcctacccg
cgcgaggagctcgtcacctacaccgccaccctgctcgagacctcggccgagcgcgtcgag
gcgcgcatcgacgccctgatcgccgaaaaatccctcgtggcgcacggcaccggaccttcc
gcgcccgccgcccgccgcccggccgcgcaggcagggcgagtcgtccccgacgagccgccc
tccgcagtccaaaatccaaaatcgagaatccaaaattccgcgatccagctgccggtcaat
tcccgcgccgaacaaaaaatcgccgacgtcgtccgccgcctcggcgcgcagccgagcggc
ctgccgccgatcaaggtcgacgccgccgtcgcgtgggcgcaggagaaggcgggcttcgaa
ttccacggcctgcagtccgccgcgatcaagcacgcgctcacgcacaagttctccatcctc
accggcggccccggcacgggcaagacgaccatcctgcgcgcgctggtcgacatcctgaag
gccaagaaagtccgcgtcaccctcgccgcccccaccggccgcgccgcccagcgcctggcc
gagacgaccggcggcttcgcctccaccatccaccgcctgctgaagttcgagaacggcgcg
ttcacggtgaacgagtcgcacccgctcgccaccgacttcctcatcgtcgacgaggcctcg
atgctcgacgtccgcctcgccgccgcgctcctgcaagccgtgccgaaccgcgcgcacctg
ctgctcgtcggcgacatcgaccagctccccagcgtcggcgccggcaacgtcctcaaggac
ctgatcgcggtcagctctcaactctcaaccctcaactctcatctcgagtcaccggccctg
ccggtgactcgcctgtccttcgtctaccgccagggcaaggagagcgcgatcgtcaccacc
gcgcacgcgatcaacgaaggtcacgcccagccgccgccggtgctgagcgaagtcgacaag
gcgcaggcgtggagcgacctgaacttcatcgccgccaccgacgccgaggactgcctcgcg
aaaatcatcgcgctctgcacgcagttcatcccggcgcatttcaagtggttcaatccgatc
accgacgtgcaggtgcttgcgccgatgcacaagggcaccgtcggcgtcggcaatctcaac
acccgcctccaagcggcgctcaacccgcaccaggccggcctgcgggccgtcagcggcgaa
taccgtccgggcgacaagctgatccagctgcgcaacaactacgacaagggcctcttcaac
ggcgacatcggccgggtggtcagcaccgacctcaccaagggcacgctcatcgccgatttc
gacggcgagcagcacgtcttcgagcgcggcgagatgaacgaggtcgccctcgcctacgcc
atcagcatccacaaatcgcagggcagcgagtatcccgtcgtgatcgtgccgctgctgaag
gcgcacttcatgatgctccagcgcaacctcgtctacacggcgatcacgcgcggccggaag
aaggtcttcctcgtcggcgaacccgccgcctactccatggccgtgcgcaacgccgagtcg
aagcaacgctgcacccatctgcgggagaaaattctgacgtccgcttga
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