Oleiharenicola sp. Vm1: ACMYLB_13395
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Entry
ACMYLB_13395 CDS
T11510
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
olv Oleiharenicola sp. Vm1
Brite
KEGG Orthology (KO) [BR:
olv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olv03019
]
ACMYLB_13395
Messenger RNA biogenesis [BR:
olv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACMYLB_13395
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Ortholog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HD_3
Motif
Other DBs
NCBI-ProteinID:
XOM08180
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All DBs
Position
2748920..2749933
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AA seq
337 aa
AA seq
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MADIQSLLSVREIKALDKNGSDTFASVLLVRRVTSKTAKNGNPFLTVELGDKTGSFAQNV
FGDSPAFDLFTSLREGGVVRIEAKLDYYRDALSPKLLSAEPITTDQLAGSAVLANLVETA
PEDADALWTEFQQHIAAIRHPDIRATVQAVFDDIGESFRIAPAAVAMHHAYRHGLLEHTT
HMARAARALLPLYPEVDPDLALAGVLVHDTGKVIEYQGDLVTTKSRRGLLQGHVVLGYQL
VRKAGMKVKLASDLLERLEHIVLSHQGELEWGAAVIAATPEAVFVAKVDDLDAKMGMVQR
LLRNAGENPADEFSEKHFGLNSQLLLTKPKTQTATST
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatccagtccctgctcagcgtgcgcgagatcaaggcgctcgacaaaaacggc
tccgacaccttcgccagcgtcctcctcgtccgccgcgtcacgagcaagaccgcgaaaaac
ggcaacccgttcctgaccgtcgaactcggcgacaagaccggcagcttcgcccaaaacgtc
ttcggcgacagcccggccttcgacctcttcaccagcctccgcgaaggcggcgtcgtccgc
atcgaggccaagctcgactactaccgcgacgccctctcgcccaagctcctcagcgccgag
ccgatcaccaccgaccagctcgccggctccgccgtgctcgccaacctggtcgagaccgcg
cccgaggacgccgacgcgctgtggacggagttccagcagcacatcgcggccatccggcac
ccggatatccgcgccaccgtccaggccgtcttcgacgacatcggcgaatccttccgcatc
gcccccgccgccgtcgcgatgcaccacgcctaccgccacggcctgctcgagcacaccacg
cacatggcgcgcgccgcccgcgccctgctcccgctctaccccgaggtcgatcccgatctc
gccctggccggagtgctcgttcacgacaccggcaaagtcatcgaataccagggcgacctc
gtcaccaccaaaagccgccgcggcctcctgcaaggtcacgtcgtcctcggctaccaactc
gtgcgcaaagccggcatgaaggtgaagctcgcctcggacctactcgagcgcctcgaacac
atcgtgctctcccaccagggcgaactcgagtggggcgccgccgtcatcgccgccaccccg
gaggccgtcttcgttgccaaggtcgacgatctcgacgccaagatgggcatggtccagcgc
ctcctccgcaacgccggcgagaacccggccgatgagttctccgagaaacacttcggcctc
aactcgcagctgctgctgacgaagccgaagacacagaccgccacatcgacctga
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