Oleiharenicola sp. Vm1: ACMYLB_13575
Help
Entry
ACMYLB_13575 CDS
T11510
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
olv Oleiharenicola sp. Vm1
Pathway
olv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
olv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACMYLB_13575 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olv03400
]
ACMYLB_13575 (uvrB)
DNA repair and recombination proteins [BR:
olv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACMYLB_13575 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACMYLB_13575 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
AAA_22
AAA_30
Kinesin
P-loop_SecA
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XOM08210
LinkDB
All DBs
Position
complement(2784442..2786502)
Genome browser
AA seq
686 aa
AA seq
DB search
MPMFKLHADYQPTGDQPQAIEKLVASIRAGHRDQTLLGVTGSGKTFTMANVIAQLDRPTL
IISHNKTLAAQLYSEFKNFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINEEIER
LRISTTSSLVSRRDVIVVASVSCIYGLGSPEEFSQMRIQIRRGEELGRQKFLERLVDNLY
ERNDYELKRGCFRVRGDVVDVMPAYLEHGLRVEFFGDEIEALTEFEPVSGAVLRKIDQFD
LYPANQYVTSRGKLEGAIAGIKRELAERVALFEREQKFLEAQRIKMRTTYDLEMLQEMGF
CNGIENYSLHLTGRKPGERPFCLIDFFPKDFLTFIDESHVSVSQIGGMYNGDIARKQTLV
NFGFRLPSALDNRPQSFAEFQQITGQTLYVSATPAKFELERSAVVAEQVIRPTGLLDPEI
TLRPTKGQVEDLIGEIRRAVEQGERVLVTTLTKRLSEDITSYLRDAKIRVEYLHSDIDAL
ERVEILRNLRQGNFDVLVGINLLREGLDLPEVALVAILDADKEGFLRSETSLLQTAGRAA
RHEKGRVIFYADVQTDSIRRTIEETRRRREKQMAYNLAHGITPRSVKRAAQASLHVYDGT
GADRNAAAVAEDIDDVAAVIAELEDEMQEAANRLEFERAALLRDQIATLKSGGKATPPSG
SGARGARKNAARNRRGVEAQRPVPAL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgttcaagctgcatgccgattaccagcccacgggcgaccagccgcaggcgatc
gagaagctcgtcgcctcgatccgcgccggccaccgcgaccagacgctgctcggcgtcacg
ggctcgggcaagacgttcacgatggccaacgtcatcgcgcagctcgaccggccgacgctg
atcatctcgcacaacaagaccctggcggcgcagctctactcggagttcaagaatttcttc
cccgagaacgcggtcgaatacttcgtcagctactacgactactaccagcccgaggcctac
gtgccgtcgagcgacacctacatcgagaaggactcgtcgatcaacgaggagatcgagcgc
ctgcgcatctcgaccaccagctcgctggtgagccggcgcgacgtgatcgtggttgcgagc
gtctcgtgcatctacggcctcggctcgcccgaggagttttcgcagatgcgcatccagatc
cgccggggcgaggagctcgggcggcagaagtttctcgagcggctggtggacaatctttac
gagcggaacgactacgagctgaagcgcggctgcttccgcgtgcgcggcgacgtggtggac
gtcatgccggcctacctcgagcacggcctgcgggtggagttcttcggcgacgagatcgag
gcgctgacggagttcgagccggtgagcggcgcggtgctgcgcaagatcgaccagttcgac
ctttatcccgccaaccaatacgtcacctcgcgcggcaagctcgagggcgcgatcgccggc
atcaagcgcgagctggccgagcgcgtggcgctcttcgagcgcgagcagaagttcctcgag
gcgcagcggatcaagatgcgcacgacctacgacctcgagatgctccaggaaatgggcttc
tgcaacggcatcgagaactactcgctgcatctcaccggccggaagccgggcgagcggccg
ttctgcctgatcgactttttcccgaaggatttcctcaccttcatcgacgagagccacgtg
agcgtctcccagatcggcgggatgtataacggcgacatcgcgcgcaagcagacgctggtg
aacttcggcttccgtctgccgtcggcgctcgacaaccgcccgcagagcttcgcggagttc
cagcagatcacggggcagacgctctacgtctccgccacgccggcgaagttcgagctcgag
cgctcggccgtcgtggccgaacaggtgatccgccccaccggcctgctcgatccggagatc
acgctgcgcccgaccaaggggcaggtggaggacctgatcggcgaaatccgccgcgcggtg
gagcagggcgagcgcgtgctggtcacgacgctgacgaagcgcctctccgaggacatcacc
agctacctgcgcgacgcgaagatccgcgtcgagtatctgcactccgacatcgatgcgctc
gagcgcgtcgagatcctgcgcaatctccgccagggcaacttcgacgtcctcgtcggcatc
aacctgctccgcgagggcctcgacctgcccgaggtcgcgctggtcgcgatcctcgatgcc
gacaaggagggcttcctccgcagcgagaccagcctgctgcagaccgccggccgcgccgcc
cgccacgagaaggggcgcgtgatcttctacgccgacgtccagaccgattcgatccgccgc
accatcgaggagacgcggcgccgccgcgagaagcagatggcctacaacctcgcccacggc
atcaccccgcgcagcgtcaagcgcgccgcccaggcgagcctgcacgtctacgacggcacg
ggcgcggaccggaacgccgccgcggtggccgaggacatcgacgacgtcgccgcggtgatt
gccgagctcgaggacgagatgcaggaggcggcgaacaggctcgagttcgagcgcgccgcg
ctgctccgcgaccagatcgcgaccctcaagtccggcggcaaggcgacgccgccctccggt
tccggcgcgcgcggcgccaggaaaaacgccgcccgaaatcggcgcggcgttgaggctcag
cggccggtgccggccttgtag
DBGET
integrated database retrieval system
