Oleiharenicola sp. Vm1: ACMYLB_16295
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Entry
ACMYLB_16295 CDS
T11510
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
olv Oleiharenicola sp. Vm1
Pathway
olv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
olv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACMYLB_16295
09124 Replication and repair
03420 Nucleotide excision repair
ACMYLB_16295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olv03021
]
ACMYLB_16295
03036 Chromosome and associated proteins [BR:
olv03036
]
ACMYLB_16295
03400 DNA repair and recombination proteins [BR:
olv03400
]
ACMYLB_16295
Enzymes [BR:
olv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACMYLB_16295
Transcription machinery [BR:
olv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACMYLB_16295
Chromosome and associated proteins [BR:
olv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACMYLB_16295
DNA repair and recombination proteins [BR:
olv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACMYLB_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
nSTAND_NTPase5
PhoH
Motif
Other DBs
NCBI-ProteinID:
XOM08702
LinkDB
All DBs
Position
3384882..3387212
Genome browser
AA seq
776 aa
AA seq
DB search
MQFSLATQTASLSVGEFSDFALGPREGGGGSAGVWRAQLGQHWHNELRAQTEREHTVDGS
LRPDVAFEIPIEGRLVHRGWTLALAGRIDQLVGSTLREIKTVTRPLPADEPVLRADYSPY
FLQLATYVVLRRLQGAREVRAELVFVEAGSGLAQTLALTAFDEALVTHQLDAVVEFLELQ
RRAAARRHRLAFQSPFPSLRPGQETIHADLAAAFGRAPVVLLEAPTGYGKTGCALEFALG
ELRSARYDRLVWLTGKSTGQLQVVETLRRMTAAPGDLAFWQVRNKGEHCINVEFHCVRDS
CGFLAGAEERWPASGLARFYRDPAQARDLDTLRAAGREAHLCPYEITRTALAFNDVWIGD
YNYVFAPDNRGLFFDQPGFDPARTLLIVDEAHNLPSRVAAAYSHTAHDGDVRALLAELDH
QRAPTPLVLAVETWARTLASVPPCEVLDGALEADARDALDRLAELVTTLPLDYAALGPHH
SETLWQFAKLHDFLHDPRLRRLLWSRRAGELEFTCVDATEAIGESLAAFGGTLLMSATLA
PFDSFAASCGVTNHATLRAPAPWRHGAYDVAVDLRVSTTLRGRAASYGTTAETIERLHAA
SGRAVAVFFPSYAYAESVLRALDQIGSPLRASLQPKLPDLAAQAAWVEETLALADALFLV
LGSSFAESIDLLGGRVSHAMVVGPALPEVNAVQRARLDAFSALGRDAAFRRVYQIPGLQK
VNQALGRLVRGPGHHAKVLLHCQRFAETSYASLLDPECQHYREVFTAADLAAWLDA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctccctcgccacccagaccgccagcctgagcgtgggggagttttccgacttc
gccctcggtccgcgcgagggcggcggcggctccgccggcgtctggcgcgcccagctcggc
cagcactggcacaacgagctccgcgcccagaccgagcgcgagcacacggtggacggctcg
ctccgccccgatgtcgccttcgagatcccgatcgagggccgcctcgtccaccgcggctgg
acgctcgcgctggcgggccgcatcgaccagctggtcggctcgaccttgcgcgagatcaag
accgtcacgcgcccgctgcccgcggacgagcccgtgctgcgcgccgactacagcccgtat
tttctccagctcgcgacctacgtcgtcctccgccgcctccagggcgcgcgcgaggtgcgg
gcggagctcgtcttcgtcgaggccggctccggtctcgcccagacgctcgcgctcaccgcg
ttcgacgaggcgctggtcacgcaccagctcgacgccgtcgtcgagttcctcgagctgcag
cgccgcgccgccgcgcggcgccaccgcctcgcgttccagtcgccctttccctcgctccgc
ccgggccaggaaaccatccacgccgatctcgccgccgcgttcggccgcgcgcccgtcgtc
ctgctcgaggcgccgaccggctacggcaagaccggctgcgcgctcgagttcgcgctcggg
gagctccggtccgcccgctacgaccggctggtctggctgacaggcaaatccaccggccag
ctgcaggtggtcgagacgctccgccgcatgaccgccgccccgggcgacctcgcgttctgg
caggtgcgcaacaagggcgagcactgcatcaacgtcgagtttcactgcgtgcgcgacagc
tgcggcttcctcgccggcgccgaggagcgctggcccgcgagcgggctcgcccgcttctac
cgcgacccggcgcaggcccgcgacctcgacaccctccgcgccgccggccgcgaggcgcac
ctctgtccctacgagatcacgcgcaccgcgctcgcgttcaacgacgtctggatcggcgac
tacaactacgtcttcgcccccgacaaccgcgggctgttcttcgaccagcccggcttcgat
cccgcgcgcacgctgctgatcgtcgacgaggcgcacaacctgccctcgcgcgtcgccgcc
gcctactcgcacacggcccacgacggcgacgtgcgcgcgctcctcgccgagctcgaccac
cagcgcgcgccgacgccgctcgtcctcgccgtcgagacctgggcgcgcacgctcgccagc
gtcccgccctgcgaggtgctcgacggcgcgctcgaggccgatgcgcgcgacgccctcgac
cggctcgccgagctcgtcaccacgctgcccctcgactacgccgccctcggcccgcaccac
agcgagacgctctggcagttcgccaagctccacgacttcctgcacgatccgcggctgcgc
cgcctgctctggtcgcgccgcgcgggcgagctggagttcacctgcgtcgacgccaccgag
gccatcggcgaatcgctcgcggccttcggcgggacgctgctgatgtcggccaccctggcg
ccgttcgattccttcgccgcctcctgcggcgtgacaaaccacgccacgctccgcgcaccg
gcgccgtggcgccacggcgcctacgacgtcgcggtggacctccgcgtctccaccaccctc
cgcgggcgcgccgcgagctacggcaccaccgcggagacgatcgagcggctccacgccgcc
tcggggcgcgccgtcgccgtctttttcccgtcctacgcctacgccgaaagcgtcctgcgc
gcgctcgaccagatcggctcgccgctgcgcgcgtcgctccagccgaagctccccgacctc
gccgcgcaggccgcgtgggtcgaggagacgctggcgctggccgacgcgctgttcctcgtg
ctcggcagcagcttcgccgagagcatcgacctgctcggcggccgcgtgtcgcacgccatg
gtcgtcggccccgcgctgcccgaggtgaacgccgtgcagcgcgcccgcctcgacgccttc
agcgcgctcggccgcgacgccgccttccgccgcgtctaccagattcccggcctgcagaag
gtgaaccaggccctcggccgcctcgtgcgcggccccggccaccacgccaaggtgctgctg
cactgccagcgcttcgccgagacgagctacgcctcgctgctcgatcccgaatgccagcac
taccgcgaggtcttcaccgccgccgacctcgccgcgtggctggacgcgtaa
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