Oleiharenicola sp. Vm1: ACMYLB_19330
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Entry
ACMYLB_19330 CDS
T11510
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
olv Oleiharenicola sp. Vm1
Pathway
olv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMYLB_19330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olv03019
]
ACMYLB_19330 (pnp)
03016 Transfer RNA biogenesis [BR:
olv03016
]
ACMYLB_19330 (pnp)
Enzymes [BR:
olv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACMYLB_19330 (pnp)
Messenger RNA biogenesis [BR:
olv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACMYLB_19330 (pnp)
Transfer RNA biogenesis [BR:
olv03016
]
Prokaryotic type
tRNA degradation factors
ACMYLB_19330 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
XOM09259
LinkDB
All DBs
Position
4036657..4038855
Genome browser
AA seq
732 aa
AA seq
DB search
MNQKYNVTVPGLGIQFSTGSIGNLANGAVIVTVGETNLMVTACVAQNMRPGQDFFPLTVD
YREKYAAAGRFPGGYFKREGRPSEKEILTSRLCDRPCRPLFPEGFLNEVQIIGQLLSADQ
INDADIPMINGASAALAISDIPWNGPIAGVRVGLIDGQFVANPNLEQMLSSSLDLIYVGT
EKDMLMIEGSADQLPEEEFIKALEFGHQAIQPIIAAIKDLVAQCGKPKATFALVGATPEA
RAIIERVVPAQRIADAIFGKEKAARGAAVKLLKEEAKAALTAELGADKFTDVDLNVVFED
LQYKAYRQTVLAKGVRADGRGQKDIRPLTAQVGVLPRVHGSAMFQRGDTQNIAITTLGPT
KEAQDMDGLTGGATSKSFLLHYNFPPFSVGETGRFTGPGRREIGHGALAERSLVPVLPPE
DVFPYSIRVVSEIMASNGSTSMASICGGCLSLMDAGVPIIAPVAGISCGLMTEMAADGSI
TKWTTITDILGEEDHFGDMDFKLAGTTKGITGFQLDLKINGLPFEIAKTAIFQARDARIE
ILKTMLAALPAPRQDLSKYAPRIQTIQIDPEKIGLLIGPGGKTIRRITETTGAQIDIAED
DSGKVFIYSNNADAMNRAVQEIDALCGGGAQIEMGKIYTGRVTGTKEFGAFVECLPGKEG
LVHISELADFRVRRTEDVVKVGDSITVKCIGIDERSGKVRLSRKAAMKDLEAQKQGGEAA
PAAPAADAPAQS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaatacaacgttacggtcccgggtctcgggatccagttctccaccggctcg
atcggcaatctcgccaacggcgccgtcatcgtcaccgtcggcgagaccaacctcatggtc
acggcctgcgtcgcgcagaacatgcgccccggccaggacttcttccccctcacggtcgac
taccgcgaaaaatacgccgccgccggccgtttcccgggcggctacttcaagcgcgaaggc
cgcccctccgagaaggaaatcctcacctcgcgcctctgcgaccgcccctgccgcccgctc
ttcccggaaggcttcctcaatgaagtccagatcatcggccagctcctgagcgccgaccag
atcaacgacgccgacatcccgatgatcaacggcgcctccgccgccctcgcgatctcggac
attccgtggaatgggccgatcgccggcgtccgcgtcggcctcatcgacggccagttcgtc
gccaacccgaacctcgagcagatgctctcctcgtcgctcgacctcatctacgtcggcacc
gagaaagacatgctgatgatcgaaggctcggccgaccagctgccggaagaggagttcatc
aaggccctcgagttcggtcaccaggccatccagccgatcatcgccgcgatcaaggatctc
gtggcccagtgcggcaaaccgaaggccaccttcgccctcgtcggcgccacgcccgaggcc
cgcgccatcatcgagcgcgtcgttcccgcccagcgcatcgctgacgccatcttcggcaag
gaaaaggccgcccgcggcgccgccgtgaagctcctcaaggaggaagccaaggccgccctc
accgccgagctcggcgccgacaagttcaccgacgtcgacctgaacgtcgtgttcgaagac
ctgcaatacaaggcctaccgccagaccgtcctcgccaagggcgtccgcgccgacggccgc
ggccagaaggacatccgcccgctgaccgcccaggtcggcgtcctcccgcgcgtgcacggc
tccgccatgttccagcgcggcgacacccagaacatcgccatcaccaccctcgggcccacc
aaggaagcccaggacatggacggcctgaccggcggcgcgacctccaagtcgttcctcctg
cactacaacttcccgccgttctccgtcggcgaaaccggccgcttcaccggcccgggccgc
cgcgaaatcggccacggcgccctcgccgagcgctcgctcgtcccggtgctcccgcccgaa
gacgtgttcccctactccatccgcgtcgtctccgagatcatggcctccaacggctcgacc
tcgatggcgtcgatctgcggcggctgcttgtccctcatggacgcgggcgtgccgatcatc
gctccggtcgccggcatctcctgcggcctcatgaccgaaatggccgccgacggctcgatc
accaagtggaccacgatcaccgacatcctcggtgaggaagaccacttcggcgacatggac
ttcaagctcgccggcaccaccaagggcatcacgggcttccagctcgacctcaagatcaac
ggcctgcccttcgagatcgccaagaccgcgatcttccaggcccgcgacgcgcgcatcgag
atcctcaagaccatgctcgccgccctcccggcgccgcgccaggatctcagcaaatacgct
ccgcgcatccagacgatccagatcgatcccgagaagatcggcctgctcatcggacccggc
ggcaagacgatccgccgcatcaccgagacgaccggcgcgcagatcgacatcgccgaggac
gactccggcaaggtgttcatctactccaacaacgccgacgcgatgaaccgcgccgtgcag
gagatcgacgccctttgcggtggcggcgcccagatcgagatgggcaagatctacaccggc
cgcgtcaccggcacgaaggagttcggcgcgttcgtcgagtgcctcccgggcaaggaaggc
ctcgtgcacatctccgagctcgcggacttccgcgtccgccgcaccgaggacgtcgtcaag
gtcggcgactcgatcacggtgaagtgcatcggcatcgacgagcgctccggcaaggtccgc
ctcagccgcaaggccgcgatgaaggacctcgaggcccagaagcagggtggcgaagccgcc
cccgccgctccggccgccgacgcccccgcgcagtcctga
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