Oenanthe melanoleuca (Eastern black-eared wheatear): 130248971
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Entry
130248971 CDS
T09236
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130248971 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130248971 (DIS3)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130248971 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
130248971
NCBI-ProteinID:
XP_056339170
LinkDB
All DBs
Position
1:complement(63725155..63743913)
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AA seq
962 aa
AA seq
DB search
MLTSRTFVKRTRAGAVVKVVREHYLRDDIACGAAACRLCTGTGSGSGSGSAPGLEARPSG
PASSLCPGPHFLLPDTNLILHQIDILEDPVIKNVIVLQTVLQEVRHRSAPVYKRIRDMIQ
NPEKHFYSFTNEHHRETYIEQNRGETSNDRNDRAIRVAVKWYSEHLKKTEDEEKIQVILL
TNDKTNKEKALEEGITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKVIFPEHIPL
SKLQQGIKSGIYLQGTYRANRENYLEATVWVHGDAEENKEIIIQGLKHLNRAIHEDVVAV
ELLAKDEWVAPSSVVLQDDGQNEEDIENEDEKENILKTSVNKDMLRPTGRVVGIIKRNWR
PYCGMLSKSQIKEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNG
HFVKNLGSAGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLS
VCSVDPPGCTDIDDALHFREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCE
KRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQ
MRIDSATMNDDITVSLRGLNKLAKILKKKRIDNGALTLASPEVRFHMDSETHDPIDLQTK
ELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIK
TDSAKALAESLDKAESPTFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTH
FTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASVAF
HTQLFFKTKGVVNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKTTPKLEYNSEVPSL
TVEDTTFHVFDKVKVNIMLDDSNIQHQKMRMVLVEPKISGNYMPAEASSKDEPEKKKKKL
QK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcgtgaagcgcacgcgggcgggcgcggtggtgaaggtggtg
cgcgagcattacctgcgcgacgacatcgcgtgcggcgccgccgcgtgccgcctgtgcacc
ggcaccggcagcgggagcggcagcgggagcgcgcccgggctggaggcgcggcccagcggc
cccgccagcagcctctgccccgggccgcacttcctcctgcccgacaccaacctgatcctg
caccagattgatatccttgaagatcctgttattaagaatgtcattgtgctgcagactgtc
ctacaagaagtcaggcatcggagtgcaccagtgtacaagcgaattagggacatgattcaa
aacccagaaaaacatttctattctttcaccaatgagcatcacagagaaacatacatagag
cagaaccgaggagaaacttccaatgaccgcaatgacagagccattcgggtagcagtgaaa
tggtacagtgaacacttgaagaaaacagaggatgaggaaaagattcaagttatcctttta
acaaatgacaaaactaataaagagaaggctctggaggaaggaataactgcttatacatgt
gaggagtatataaaaagtttgacagctaatcctgagcttgtagatcgtctcgcttgtgta
tctgatgaagggaaagaaatagaaggtggaaaagtaatattcccagaacatattcctctt
agcaaattgcagcaaggaataaaatctggtatttacctccaaggaacttacagggcaaac
agagagaattatcttgaagctactgtttgggtacatggagatgctgaagaaaacaaagag
ataattatacagggactgaaacatttaaaccgagcaattcatgaagatgttgtagctgtg
gagctgttggcaaaagatgagtgggtggcaccatcctcagtggtcttgcaagatgatggc
cagaatgaagaggacattgaaaatgaagacgagaaagaaaacattctgaagacttccgtt
aacaaggacatgctgaggcctacgggaagagtagtgggcattataaaaagaaactggcgg
ccgtattgtgggatgctttccaagtcacagatcaaagaggcaaggcgccatttgtttaca
ccagctgatcgcagaattcctcgcattcgaatagaaaccagacaagcagatacactggaa
gggcaaagaataattgttgccattgatggttggcccaggaattccaggtatcctaatggt
cattttgtaaagaatttgggaagcgctggagataaagagacagagacagaagttcttctg
cttgaacatgatgtccctcaccaggctttttcccaggctgtccttagtttcctaccaaaa
atgccatggagcattacagaagaggatatgaaacacagagaggacttaaggcatctgagt
gtttgtagtgttgatcctccgggttgcacagatattgatgatgcattacattttagagaa
ataggaaatggaaatctagaggttggtgtacatattgcagatgtcagtcattttattcgc
ccaggaaatgctttggatgaggagtcagtaaaaagaggaacaacagtgtatctgtgtgaa
aaaaggattgatatggttccagaactgcttagttccaacttatgctctctgagatctaat
gtggacaggctggcattttcatgcatatgggaaatgaaccataaggctgaaattctaaaa
accagatttacaaagagtattattaattccaaggcttctcttacatatgctgaagcacag
atgagaatcgattcagcaactatgaatgatgatattactgtcagtctacgtggactaaac
aaattagcaaaaattctgaagaagaaaagaattgataatggagccttgacacttgcatca
ccagaagttcgtttccacatggacagtgaaactcatgatcctattgatctgcagactaag
gagctcaaagagacgaattccatggttgaagagttcatgttgcttgccaatatttctgta
gcacaaaaaatttatgatgagttcccagaatttgccttgctccggaaacatcccgctcct
cccccatcaaattatgacatccttgtgaaggctgcaaagtctaagaatttggaaattaag
acagattcagcaaaggctttagctgaatcattagacaaagctgaatctcctacattcccc
tacctaaatacactgctgcgaattttgaccactcgctgcatgatgcaagctgtttatttc
tgctcgggaatggataatgattttcatcactatggtttagcctcacctatttacactcac
tttacctcacctatcagaaggtatgctgatatcatagtccatcggcttttggcagtggcc
ataggagcagacagtacttacccagaacttacagataaacacaaactggcagagatgtgt
aaaaatctcaattaccgacataaaatggcacaatatgcacaaagagcctctgtggcattc
catacacagctattcttcaaaaccaagggagtagtaaatgaagatgcatatatattattt
gtaagaaaaaatgcaattgtggttctgattcccaagtatgggttagaaggaacagtcttc
tttgaagaaaaagataaaacaacaccaaaactggagtacaacagtgaggtgccatcactt
actgtggaagatacaacatttcatgtatttgataaagttaaagtgaacattatgttagat
gattccaacatccaacatcagaaaatgcggatggtcttggtagaacccaagatatcagga
aattatatgcctgcagaggcaagcagcaaggatgaaccagagaaaaagaaaaagaaacta
caaaaatag
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