Oenanthe melanoleuca (Eastern black-eared wheatear): 130248985
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Entry
130248985 CDS
T09236
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
oma04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130248985 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130248985 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oma02000
]
130248985 (NPC1)
Transporters [BR:
oma02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
130248985 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
130248985
NCBI-ProteinID:
XP_056339222
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Position
2:46176542..46204138
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AA seq
1285 aa
AA seq
DB search
MGTPQGSPGRGGLGFLVLLLLLSPVRVLPQTCIWYGECGVASGDKRYNCAYDGPPIALPE
DGYDLMQELCPGLFFGNVSTCCDVHQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCELTC
SPNQSDFLNVTSTIPYYDPVLKENKSSITELQYFIGNRFANAMYNACKDVEAPSSNVKAL
GLLCGKDVKDCNATNWIEYMFSKDNGQTPFSIIPIFSDVPVHGMKPMNNATKGCNESMDD
STGPCSCQDCSIVCGPKPQPPPLPPPWLLFGLDAVYVIMWISYMGFLLIFFALVFGVWCY
RRRHFVSEYTPIDSNVAFSANSHHDQGNITCGERLGERFENGLRMTFTSWGAFCVRNPRP
VILFSVVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDTHFGPFFRTEQIIIQA
PKSRPDTYSPYPSGEDVPFGPPLTKDILHQVLDLQDAIVNITASYDNETVMLKDICLAPL
APYNNNCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLHDP
CLGTFGGPVFPWLVLGGYDDDNYNNATALVITFPVNNYYNDSKKLMKALAWEKEFINFLK
NYNNSNLTISFSAERSIEDEINRESNSDVSVVLISYIVMFVYISIALGHIQSCRRLLVDS
KISLGIAGILIVLSSVACSIGIFSYFGVPLTLIVIEVIPFLVLAIGVDNIFIMVQTLQRD
ERIQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLIDF
ILQVTCFVSLLGLDIKRQESNRLDILCCIKSSEEMSGVQRSENMLFLFFKNLFSPYLLKD
WMRPIVIAVFVGILSFSAAVMHNVEIGLDQSLSMPDDSYVIDYFSHFSKYLHAGPPVYFV
LEEGHNYTSLEGQNMVCGGMGCNNDSLVQQIFNAAEIGSYTRIGYAPSSWIDDYFDWVKP
QSSCCRVYNTTGQFCNASVSDPSCTRCRPLTPEGKQRPQGEDFMTFLPMFLSDNPNPKCG
KGGHAAYYSAVNFINNKTEIGATYFMTYHTVLKTSSDFIDAMRKARIIADNITETMGIKE
KNYRVFPYSVFYVFYEQYLTIVHDAIFNLCISLGSIFLVTTVLLGFEVWAAVVVSITIAM
IIVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTISTKGSRVERAEEALSH
MGSSVFSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVVLGATHGLIFLPVLLSYIGP
SVNKAKTRAAQERTRGTERERLLYF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggggacccctcaaggcagccccgggcgaggcggcctcggcttcctcgtcctcctcctg
cttctgtcgcccgtgcgggtactcccacaaacgtgtatctggtatggagaatgtggagtt
gcttctggagacaagaggtacaactgcgcttatgatgggccaccaatagcactaccagaa
gatggctatgacttaatgcaggaactctgtccaggtttattctttggcaatgttagcact
tgctgtgatgttcatcagcttcagactttgaaaaataacttgcagctgcctctgcagttt
ctctccagatgtccttcatgtttttacaacttgataaacctcttctgtgaactgacttgt
agtccaaatcaatctgactttttgaatgttacaagcaccataccttattatgatcccgtt
ttaaaagagaacaaaagtagcattacagagctgcagtactttattggaaatcgatttgca
aatgcaatgtacaatgcctgcaaagatgtggaggctccatcgagcaatgttaaagcactg
gggttgctgtgtgggaaggatgtcaaggactgcaatgcaaccaactggattgagtacatg
tttagtaaagacaatggacaaactcctttcagcataattccaatcttttcagatgttcct
gtccatggaatgaagcctatgaataatgctaccaaaggctgtaatgagtctatggatgat
tcaacaggaccatgcagctgtcaggactgttcaattgtttgtggtccaaaacctcaaccc
cctccattgcctcctccttggctgttgtttggtttggatgctgtatatgtcatcatgtgg
atctcatacatgggctttctactcatattttttgcactggtttttggagtctggtgttac
aggcggcgtcactttgtctcggagtacaccccaattgacagcaatgtagccttttctgcg
aattctcaccatgaccaaggaaacattacttgtggtgaaaggcttggtgaaaggtttgag
aatggcctgaggatgacatttacctcatggggggctttctgcgtcagaaatccacgtcct
gttatcctcttctctgtggtcttcattgcaatgtgctgctcaggctttgtgtatattaaa
gcaactacaaatcctgtagatctctggtcagccccaagcagccaagcccgcaaagagaag
gaatactttgacacacactttgggcctttcttccgtactgaacagattatcattcaagca
ccaaagagtcgcccagacacctactcaccttacccatcaggagaagatgtaccttttggg
cctcctcttactaaagatattctccatcaggtattggatttgcaggatgctattgtcaac
ataactgcttcttatgacaatgagactgtaatgctgaaggacatttgcctggctcctctt
gctccctacaacaacaactgcactatcctgagcgtactcaactactttcagaacagccat
tctgtcctggatcacactgttggggatgagttctttgtctatgctgattaccacactcac
ttcttatactgtgttcgggctccagcatcactgaatgacacaagcttgcttcacgatccc
tgcttaggaacgtttggtggacctgtatttccgtggctggtgttgggaggatacgatgat
gataactataataatgctacagctcttgttattacttttcctgtcaacaactactacaat
gattcaaaaaagctgatgaaagccttggcatgggaaaaagaatttattaactttctgaag
aactataataattcaaacttaacaatatcattttctgctgaacggagtattgaagacgag
atcaaccgtgaaagcaacagtgatgtcagcgttgtgttgataagctatattgtgatgttt
gtgtacatttcaatagctttgggacatatccagagctgtagaagactgctggtggattcg
aagatctctctgggcattgcaggcatcctgattgtactgagctcagtagcatgttctata
ggcattttcagctactttggagtcccactgacactgattgtgatagaagtaattcctttc
ttggtgctggctattggagtggacaatatcttcattatggttcagacacttcagagagat
gaacgcattcagggtgaaactctggataaacagattggcagagtcttgggagatgtggca
cccagtatgtttctctcatccttttcggagactgtggcattctttcttgggacactgtct
acgatgccagcggttcgcacgttctccctgtttgctggaatggctgtgctcatagacttt
attcttcaagtcacttgcttcgtgagtctcctgggcttggatattaagcgtcaagagagt
aatagactggatattctgtgttgcatcaaaagcagtgaagaaatgagtggagtccagcgt
tctgagaacatgttatttcttttcttcaaaaatctgttttctccgtatctgcttaaggat
tggatgagaccaatagtaatagcagtgtttgtgggtatcctgtcattcagtgcagcagtt
atgcacaatgtagagattggactagatcagtctctctcaatgccagatgactcctatgta
atagattacttcagccacttcagcaagtacctgcatgcaggtccccctgtctactttgtc
ctagaagaaggacacaactacacctctttggaagggcagaacatggtgtgtggtggaatg
ggatgtaataatgattcacttgtccagcaaatcttcaatgctgcggaaattggtagctac
acaaggataggctatgccccatcatcctggattgatgactactttgactgggtgaagcca
cagtcgtcctgttgcagagtgtacaataccactggacagttctgcaatgcttcagtcagc
gatccatcctgcacccgttgtcgaccactgactccagaaggcaagcagagaccacagggt
gaagacttcatgacctttttgccaatgttcctgtcggacaaccctaatcctaaatgtggc
aaaggaggacatgctgcgtattactccgctgtcaactttataaacaacaaaactgagatt
ggagccacttactttatgacttaccatactgtactgaaaacatcatctgactttattgat
gctatgaggaaagctcggattatagcagacaatattactgaaaccatgggcatcaaagag
aagaactaccgagtgtttccgtacagtgtgttttatgtcttctatgagcaatacttgaca
attgtgcacgatgctatctttaacctctgcatctctttgggatcaatatttctggtgaca
actgtgcttcttggttttgaagtatgggctgctgttgtggtttcaataactattgctatg
ataattgtcaacatgtttggagtgatgtggctctggggcatcagcttgaatgcagtttca
ttagtaaatcttgtcatgagctgtggtattgctgtggaattctgcagtcatgtgacaagg
gcattcaccatcagtaccaagggcagtagagtggagcgtgcagaagaagctctgtctcac
atgggcagctcagttttcagtggtatcacgctgaccaaatttggaggaattgtagtattg
gctttttccaaatctcaaatcttcaagatattctacttcagaatgtatcttgctatggtt
gtgctgggagcaacacatggattgatatttcttccggttctgcttagttacataggccca
tcagtaaataaagctaaaactcgtgctgcacaagagaggaccagaggtacagaacgggaa
agactcctctacttctag
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integrated database retrieval system
