Oenanthe melanoleuca (Eastern black-eared wheatear): 130249234
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Entry
130249234 CDS
T09236
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130249234 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130249234 (DROSHA)
03009 Ribosome biogenesis [BR:
oma03009
]
130249234 (DROSHA)
03036 Chromosome and associated proteins [BR:
oma03036
]
130249234 (DROSHA)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
130249234 (DROSHA)
Messenger RNA biogenesis [BR:
oma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
130249234 (DROSHA)
Ribosome biogenesis [BR:
oma03009
]
Eukaryotic type
90S particles
RNase
130249234 (DROSHA)
Prokaryotic type
rRNA processing factors
130249234 (DROSHA)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
130249234 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
130249234
NCBI-ProteinID:
XP_056339802
LinkDB
All DBs
Position
2:complement(79344074..79417857)
Genome browser
AA seq
1336 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSAQTYRPQNLRQLHPQQPSVQYQYEQQPAPPTTYSSPPAT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPTPPPVPNPSN
APVPGTPAGQSTFPYMMPPPTVPHPPPPPVVPQQVSYQPVYSAGYSQQSFPPPGFSGYQH
GSGSFPGSAAGSSAGSGHFRHAGQYQGDKAQGERRSPDRSKHYEEHRHREHGHGHGDRHR
SAGHGDRRERGRSPDRRRQESSRHRADYDRGRISPRHRSYERNRERERERHRHRDSRRSP
SPDRSYKKDYKRAGSRSPSRERKRTRWEEDRERWSENQSSSKEKNYTAVKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESECDSEDDSSCSSSSDSDVIDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRYHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHIHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELERFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNEKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEFAITNDKTKRPVTLRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKELRWE
REHQERESEETEEARK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattccgggcgaggatgtccccgtggccaggggggaccaggagcacgcact
tcagcgcagacctaccgcccgcagaacctccggcagcttcacccgcagcagccctccgtg
cagtaccagtatgagcagcagcctgcgcctccaaccacctactccagccctccagccacc
ggttacatgcctcccaggccagacttcgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccgccgttcccaaaccaccagatgaggcag
agcttcccagtgcccccatgtttccctcccactcctccaccagtgccaaatcctagcaac
gctcctgtgccaggaacacctgccgggcagagcacctttccttatatgatgcctcccccc
acggtgccgcaccctcctccgccgccagtcgtgccacagcaggtcagctaccagcccgtg
tactcggcgggctactcgcagcagtccttccctccgcccggcttcagcggctaccagcac
ggctccggctccttccccggcagcgccgccggcagcagcgccggcagcggccacttccgc
cacgcggggcagtaccagggagacaaggcccagggcgagcggcgctccccggacaggagc
aagcactacgaggagcaccggcaccgcgagcacggccacgggcacggcgacaggcaccgc
tccgctggccacggcgatcggcgggagcgcggccgcagccccgacaggaggaggcaggag
agcagtcggcaccgcgcggattatgacagagggaggatatcgccgcgccacagaagttac
gagagaaacagggaacgagagagggagaggcatcggcaccgtgacagcagaagatcacca
tcaccagacagatcctacaagaaggattacaagagagccggaagccggtctccaagcaga
gagagaaagagaacccgatgggaggaggacagagagaggtggtctgagaaccagagctcc
agtaaagagaaaaattatactgctgtcaaagacaaagaatcagaggagaatgcttctgag
aaaaatgaagaggaagatgaggaattgcttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgggatctgtatgaaaagtttgacgaggagttaggaaagcgacaggcaaaa
gccaaagcagccaggccaccatgggagccaccaaaaaccaagctggatgaagatttagag
agctccagtgagtcagagtgtgactctgaagatgacagcagctgctccagcagttcagat
tcggatgtcattgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
cacgaggaattgtggtacaatgatcctggacagatgaatgatggacctttgtgcaagtgc
agtgctaaagcccggcgaacaggaataagacatggcatttatcctggtgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactataccactaccgaattactgtg
tcacctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctccatgtttgcacatgccccactaacaaacattcctctatgc
aaagtaatcaggtttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggccttgagctgttctcttcatatctattcaaagatattttggag
ttgtatgactggaatcttaaaggtccttcacttgaaaatgattctgtttcctgtcccaga
tatcacttcatgccgcggtttgtgagatttcttccagatggagggaaagaagtgctctca
atgcatcagattcttctctacttgttacgatgcagtaaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaagtatgcagaagaatgcaaa
gggatgatcgttaccagccctggcatgaaacccagctcagttcgtattgatcaactagac
cgcgaacaattcaatcccgatgtaattactttccctattattgtgcactttgggatacga
cctgctcaactcagttatgctggagatcctcaataccaaaagctgtggaagagttatgtg
aagctgcgtcacctactggctaacagtcccaaagtcaaacaggctgataaacagaaatta
tcacagagagaggaagcactgcagaaaattcgtcagaagaacacaatgaggcgtgaagtg
actgtggagttgagcagccagggattctggaaaacagggatacgctctgacgtctgccag
catgcaatgatgcttcctgtcctgacccaccatgtgcgctaccatcagtgtctgatgcac
ttggacaaattgataggctacacttttcgagataggtgcttactgcagcttgcaatgact
cacccaagccatcatttaaactttgggatgaacccagatcatgccagaaattccttatcc
aactgtgggattcgacagcccaagtatggagatagaaaagttcaccatatacacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacaagtgtccacttatactacctgtttcccaccctggaggaagggggactagctacg
taccgcactgccattgtgcagaaccagcacctggccatgctggctaagaagctggaactg
gaacgattcatgctctatgctcatggcccagacctttgcagggagtcagatctccgccat
gccatggccaactgctttgaagccctaataggagctgtttacctagagggaagcctagaa
gaagcaaaacaattatttggacgtttgctcttcaatgaaaaggacctgcgggatgtatgg
cttaattatccactacacccactccaactgcaggagtccaatactgacaggcaactcatt
gagacctctccagttcttcaaaagcttacggagtttgaggaggcaattggagtcatcttt
actcacgttcggcttctggcacgtgcattcactctgaggactgtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactctataatgcagttggtagcc
acagagtatttattcatacatttccctgatcatcatgaagggcacttaacgctgctgaga
agttctttggtgaacaacaggactcaggccaaggtggcagaagagctgggcatgcaagag
tttgccatcactaatgacaagacaaaaagacctgtaactcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgttcac
actttcatgaatgtttgcttttttccacggctaaaggagtttattttaaatcaagattgg
aatgatcctaaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaagag
ccagacattcctctctacaagaccttacagacagtgggaccttctcatgccaggacatac
acagttgcagtttacttcaagggggaaagaataggatgtggtaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagagttgaggtgggaa
agagagcatcaagagagagagtcagaggagactgaagaagcaaggaaataa
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integrated database retrieval system
