Oenanthe melanoleuca (Eastern black-eared wheatear): 130249252
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Entry
130249252 CDS
T09236
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03250
Viral life cycle - HIV-1
oma03272
Virion - Hepatitis viruses
oma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130249252 (PDCD6IP)
03272 Virion - Hepatitis viruses
130249252 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130249252 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130249252 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130249252 (PDCD6IP)
Membrane trafficking [BR:
oma04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
130249252 (PDCD6IP)
Exosome [BR:
oma04147
]
Exosomal proteins
Proteins found in most exosomes
130249252 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Methyltransf_7
T2SSM
Motif
Other DBs
NCBI-GeneID:
130249252
NCBI-ProteinID:
XP_056339840
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Position
2:100509590..100541045
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AA seq
879 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKTALGRPLDKH
ESALETLLRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIETVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRTKFKERW
QRTPSNELYKPLRAEGANYHNILSKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESIRKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAAGSKPAASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGAAAAPAAAPAPAPGASAPAASTASSQAQGPPYPTYPGYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQAPGQPPYPPPQQPGYPFPQQPYYHQQ
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcggtgcagctgaagaaggcctcggaggtggatctggccaagcca
ctatgcaagttcattcagcagagctacccgggcgccgaggcgcaggccgagcactgccgc
gccgccgaggagctcagcaggctccgcaagaccgcgctcggccgcccgctcgacaagcac
gagagcgccctggagaccctcctcagatattatgatcagctgtgttcaattgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagatgcttttgataaa
ggatcactttttggaggatctgccaaattggctctggcaagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcactggcaagccagattgcagcagaacagaatctggat
aatgatgaaggactaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagatacagtattgtcagccttgaatcgagaacctacagtggacatctctcca
gatacagttgggactctcagtcttattatgctggctcaagcccaagaagtcttttttttg
aaagcgacaagagataaaatgaaagatggtatcatagctaaattagcgaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgtcctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacagtagcatctcgctatgatgaatatataaat
gttaaagatctggttgacaaaatcaaccgtgcacttgcagctgccaaaaaagacaacgac
ttcatttaccatgaccgggttcctgacctgaaggatttggagtccattggaaaagccagt
cttgtgaagtctactccagttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtacagcaatctgtgagtgtttataaccaaaggaaggcagat
ctggtgaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttccctcaatcttcctgctgctattgaagatgtgtctggtgatactgttcctcagtct
attttgaacaagtctaagtctgtgattgagcaggggggaattgagactgttgatcagctg
atcaaagatctgcctgaactgctgcaaagaaataaagaaattctagatgaatctctgaga
ctattagatgaagaagaagctacagacaatgacctgcgaacaaaattcaaagaacgctgg
cagagaacaccatccaatgaactctataagcctctgagggcagagggagccaattaccat
aatattttgagtaaagctatgcaagcagatgggcaagtgaaggagcgctatcagactcac
cgggatacgattgcacttctgtgtaagccagaggcggaactcaatgcagccattccttct
gccaacccagcaaaaacactgcagggaaatgaggttgttaatgtcttaagaactttgctg
gccagtctggatgaagttaagaaggagagagaacaactggaaaatgacctgaaatctgtt
aattttgacatgacaagcaaattcctgactgcacttgcgcaggatggtgctataaatgag
gaggctatctctgtcactgagttggacagaatttatggaagttacacacagaaagtgcag
gaatccataagaaagcaagaagaacttctcaaaaacattcagaatgcgcatcaggatttt
tcaaagatgaaacaatcaaacaatgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcgaatgacaactttgtggaacttgtagccaatttaaaagaaggtacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcagcaaagcattgctagggag
cccagtgctccctccattcctctgcctacgtatcagaccactccagcagcaggaagtaag
ccagcagcgtcacccgctcccactccagccccaagaaccatggtggggactaaaccacag
ccaccagcacggccaccaccaccagtgatttctgcagcgagcagttcctcttctgcatta
gcaccctctggggcagctgcagctcctgctgctgctccagctcctgctccaggagccagt
gcacctgcagcaagcactgcatcttcacaggcacagggaccaccttacccaacttatcct
ggttacccagggtattgccagatgccaatgccaatgggctataatccgtacatgtatggt
cagtataatctgccgtatgctccctcacctgtgtatcaagctcctggacagccaccatat
ccgccacctcaacagcctggatacccttttcctcaacagccttattaccatcagcaataa
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