Oenanthe melanoleuca (Eastern black-eared wheatear): 130249292
Help
Entry
130249292 CDS
T09236
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130249292 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130249292 (SMARCD3)
03036 Chromosome and associated proteins [BR:
oma03036
]
130249292 (SMARCD3)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130249292 (SMARCD3)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130249292 (SMARCD3)
PBAF complex
130249292 (SMARCD3)
GBAF(ncBAF) complex
130249292 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130249292
NCBI-ProteinID:
XP_056339909
LinkDB
All DBs
Position
2:148225651..148303835
Genome browser
AA seq
485 aa
AA seq
DB search
MATDEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPQYVGSPSVRPGM
PQTVMETTRKRAAPQQVQQQQVQQQVQQQQQATQNRARSAKRRKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDGDDSDGS
IASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGF
QVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQD
SHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACY
DIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKG
YIQDLLRSQSRDLKVMTDVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSL
GVRNT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatgaagttacaggaggggctcgcaaagctacgaaaagcaaactttttgag
tttctggtccatggggtgcggcctgggatgccatcaggagctcgaatgccccatcaaggg
gctcccatgggtcctccaggcccccagtacgttggaagcccctctgtgcgacctgggatg
ccccagactgtgatggaaacaacgagaaaacgcgctgcaccacagcaggtccagcagcag
caggtgcagcagcaagtgcaacagcagcagcaagctactcagaaccgagctaggagtgcc
aagaggaggaagatggctgacaaaattctccctcagaggatccgggagctggttcctgag
tcccaggcctacatggatctcttggccttcgagcgcaaactggaccagaccattatgcgg
aagcgtgtggacattcaggaagcactgaagaggccaatgaagcaaaagcggaaactgaga
ctctacatctccaacacatttaatcctgcaaaatcagatggtgatgactccgatggcagc
attgcttcgtgggagctgcgtgtggagggaaagctcctggatgatctcagcaaacagaaa
cggaagttttcatctttttttaagagtttggtgattgaactggacaaagatctttatgga
cctgacaatcatcttgtggagtggcacagaactcctacgacccaggaaacagatggcttc
caggtgaagagacctggggatgtcagcgtgcgatgcacgttactcctcatgttggactac
cagcctcctcagttcaagctggacccgcggctggcccgtctgctggggatccacacgcag
acacgctcggccatcatccaggctctctggcagtacatcaaaaccaacaagctgcaggac
tcccacgataaggaatacattaactgcgacaagtacttccagcagatctttgactgtcca
cggctaaagttttctgaaattcctcagagactcactaacctactgctgccaccagacccg
atagtgataaaccacatcatcagtgttgaccccaacgatcagaagaagacggcctgttac
gacatagatgtagaagttgaagacccattaaagggccagatgagtagttttcttctctca
acagctaaccaacaggagataacagcattggataacaagattcatgagacaattgagtcc
ataaatcaactaaaaatacaacgtgattttatgctgagtttctccaaggatcccaaagga
tacatccaagaccttctccggtcccaaagtagggatcttaaggtgatgactgatgtggtt
ggaaacccagaggaagaacgcagagccgaattttatcacgagccatggtctcaagaagct
gtgagcagatatttctactgcaagatccagcagcgccgacaggaattggaacaatctctg
ggagtgcgcaacacataa
DBGET
integrated database retrieval system
