Oenanthe melanoleuca (Eastern black-eared wheatear): 130249367
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Entry
130249367 CDS
T09236
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130249367 (VPS50)
Membrane trafficking [BR:
oma04131
]
Protein recycling
Others
EARP complex
130249367 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
130249367
NCBI-ProteinID:
XP_056340062
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All DBs
Position
2:complement(125541430..125615348)
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVNDLSPIESFRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVIGSEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFLEQSRSPSVSPSKQPASAVSSSVTLFEQYCHGGNPFEIQADSKEDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaagctttcgaattcctacaaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatattgtgaaatatgagttggagaggcttcctccagtg
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaactggaa
cgtgttacatctttgcagagtggccttcagttagcagcagttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggctacttgcaaat
cagaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggattatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaactggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctttgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgattggaagtgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggagcacgggctttcccgaatatggcaggatgttcaattgaaagtgaaaacg
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagagttttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgagtttaagttcctggagcagtcgcgttccccgtccgtg
tcgccgagcaagcagcctgcctctgcagtttcctcctcagtgaccctgtttgagcagtac
tgccacggaggaaacccctttgaaatccaggctgacagcaaagaggatgagacagaagat
gtgttagcttctaatgggtatgagtcagatgaacaagaaaaaagtgcttatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccaataaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacgttttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattgcgcaccacactgaac
agaatccaggagagtctgattgacctggaggtatctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtcgttttg
acatctggcaattcgctgtatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcaatttgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgactatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaagaaatcatgtcacagcacaatgtatacgtagat
gctcttttgaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtc
cgtatcccattgccagtttccaacatcctttgggagcactgcatacgcctggccaataga
actcttgtggaaggctatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacatagacaggcctaagagataa
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