Oenanthe melanoleuca (Eastern black-eared wheatear): 130249372
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Entry
130249372 CDS
T09236
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130249372 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oma03009
]
130249372 (POP1)
03016 Transfer RNA biogenesis [BR:
oma03016
]
130249372 (POP1)
03029 Mitochondrial biogenesis [BR:
oma03029
]
130249372 (POP1)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
130249372 (POP1)
Ribosome biogenesis [BR:
oma03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
130249372 (POP1)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
130249372 (POP1)
Mitochondrial biogenesis [BR:
oma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
130249372 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
130249372
NCBI-ProteinID:
XP_056340072
LinkDB
All DBs
Position
2:complement(22054998..22076437)
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AA seq
1011 aa
AA seq
DB search
MSGAREKKRAKKMRNQPASVTLPAEPGPFAGGGSRACPSPALNLPGDAHSEQKQKFSNQS
SGPSYRKDQYFSKGQSRGERGRGRGGWQGGHQSISEEMPKYITVSTFAQARAAEIKAMLK
AVSQKSSNSLVFQTLPRHMRRRAMSHNIKRLPRRLQEMARKEAEKAVHQKKEQSKTKCRK
ARRRHINLVAEFNHRQRKNIWLETHIWHAKRFHMIKKWGYCLGNSPTEKSYRACYRAMTK
HCLLQDLSYYCCLELKGKENELLKQLARICSIDTGLTFQEASCLSGRFEGCLNLYRADRY
PEDMLGPVTFIWKPRDGSENRQLWIWVHPSLKQDILRELKAIFQCSEPEEVCITEAVTTS
IQEEKQVEVVMRLGNKRKKEDKEGEKAVPVKKIIGDGTRDPFQSYSWIARTTGIAISDRS
MEILRYRLIGPLSNSVLTETLKAASVQTEMADSETELNNWWVENCKDSEKVSLHQCQSAI
FELLEGMSSPSDMPPGTILGLTVGDPRVNLPKKKTKAMPDFQKYQDNDKVRQLYLKGVPA
DCAHSFIWDHDICKNVTENKISEQDLNHMRAQLLVPGSHLDLGPCESKIPILLVQQPGKM
AGEDRPGWGSGWDIYLPKGWGMAFWIPFIYRGVRVGGLQEALKHSEYQRIPHTPNDFPDC
QAGMQFAKELETSLLEKFKRRPPAKRANYVKLGTLSPFICPWGQLTKNWEGRMKASGGFL
CPSSPHPDCCTTEGQTLCDPKAEVVREASPEISEAEETMEITSSEGALKTEDVTSTQDSG
ERDEMKTSDFIVLRSEKLLMQLSAWCYPTAGKDRRIRLISRLGQKEMTEDAFLPILTRYP
RALIWVNLSLLRKGNPELHAMICIPTEDDLLHLSKDKLFCGPQEPKHRDIFKDKVQKQKE
KKKKKDNVKSLESDLAGIVDEEATEDHEDLILGLWSDALPDVTSHCSRTVLGYVTRGDFS
LAAGCGEALGFVSLTGLIYMLHNQPADKKGLVLLRTPASLQYRFARLTIEV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcgcgggagaagaagcgagccaagaagatgaggaaccagccggccagcgtc
acgctgcccgcagagccggggcccttcgccggcggcgggagcagagcctgcccttcccca
gctctaaaccttccaggagatgctcattctgagcagaagcagaaattttcaaatcagtca
tctgggccttcttacaggaaagaccaatatttttcaaaggggcaaagtagaggagagaga
ggcagaggaagaggagggtggcaaggaggacaccagagtatatctgaggaaatgccaaaa
tacataacagtgtctacctttgctcaagctcgtgctgctgagatcaaggccatgctgaaa
gcagtttcacagaagtcttccaactccctggtgttccagacccttcctaggcacatgcga
aggcgagccatgagtcacaatattaaacgcctgcccaggcggctccaggagatggccagg
aaagaggcagaaaaagctgtacatcagaagaaagaacaatcaaagactaaatgccgcaaa
gctagaagacgccacataaatttggtagcagagtttaatcacaggcaaagaaagaatatt
tggctggaaacccatatttggcatgcaaagagatttcatatgataaagaaatggggatac
tgtttaggaaacagccctacagagaagagctacagggcttgttaccgagccatgacaaag
cactgccttcttcaggacttatcatattattgttgcctggagttgaagggtaaagagaat
gagcttctgaagcaacttgctcgaatatgtagcattgacacaggattgacatttcaggag
gcttcttgtctgtctggaagatttgagggttgcctgaatctttaccgagcagatcgctat
cctgaggatatgcttggtcctgttacatttatttggaaacccagggatgggtctgaaaac
agacagttgtggatctgggtgcatccatctctcaagcaggacatactgagggagttaaaa
gcaatttttcagtgttcagagcctgaagaagtctgtattactgaggctgttacaacatca
attcaagaggaaaaacaagtggaagttgttatgaggcttggcaataaaagaaagaaggag
gataaagaaggagaaaaagctgtgcccgtgaaaaaaataattggcgatggcactagagat
ccattccagtcctactcttggatcgcacggactactggcattgcaatcagtgacagaagc
atggagattctcagataccggctgattggcccgttatcaaactccgtccttacagagaca
ctgaaagcagcttctgtccaaacagagatggcagattcagagacagaactgaataactgg
tgggtagaaaactgcaaggactctgaaaaagtatctcttcatcagtgtcaaagtgctatc
tttgagctattggaaggaatgagctcaccatcagatatgccaccaggtacaatacttggc
ctcactgttggagatcctcgagttaatttgccaaaaaagaagacaaaagccatgccagat
tttcaaaaataccaagataatgataaagttaggcagctgtacctgaagggtgtacctgca
gactgtgctcacagctttatctgggaccatgacatctgtaagaacgtcactgaaaataaa
atctcagagcaggatttaaaccatatgagagctcagttactggtacctggatcacacctt
gatttgggtccttgtgaatctaagattcccatactgttggtgcagcagccagggaaaatg
gctggagaagatcgaccaggatgggggagtggctgggatatctatctcccaaagggctgg
ggcatggctttctggatcccttttatatatcgaggtgtacgagtcggtggcttgcaagag
gcattaaagcattctgaataccaaagaatacctcacactccaaatgatttcccagactgc
caggcaggaatgcagtttgccaaagaactggaaaccagtcttcttgaaaaattcaaacga
cgtccacctgcaaaaagggcaaattatgtcaagctgggcactctgtctcctttcatctgt
ccttgggggcagctgaccaagaactgggaaggaagaatgaaagcttcaggaggattttta
tgtccttcttccccacaccctgactgctgcacaactgaagggcagaccctttgtgacccc
aaagcagaagtggtcagagaagcttcccctgagattagtgaggcagaggagaccatggaa
ataacaagttctgaaggtgccctaaagacagaggatgttacaagcacccaagattctggt
gagagagatgaaatgaagacaagtgactttattgttctcaggagtgagaaactactaatg
cagttatcagcctggtgttatcccactgctgggaaagatcggcgaatccgccttatttct
cgactgggacagaaggaaatgactgaagatgcttttttgccaatcttgacaagatacccg
agggctctcatctgggtcaacttgtcactcttgagaaaggggaaccctgaattacatgcc
atgatttgcatcccaacagaagatgacttgctgcatctaagcaaagacaaactcttctgt
ggtccacaagaacccaaacatcgtgacatattcaaggacaaggtacagaagcaaaaagag
aagaagaagaaaaaggataatgtgaagtctctagagagtgaccttgcaggcattgtggat
gaagaagcaactgaggaccatgaagacctcattcttggtctttggtcagatgctctccca
gatgttacttcccactgctccaggactgtcttggggtatgtcactcgaggggatttttcg
ttggctgcaggctgtggagaagcactgggttttgttagcttgactgggttaatttatatg
ttacacaaccagccagcagataaaaaagggcttgttttgttaaggactccagcatcttta
cagtacagatttgcaagacttactattgaggtttaa
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