Oenanthe melanoleuca (Eastern black-eared wheatear): 130249404
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Entry
130249404 CDS
T09236
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oma04990
]
130249404 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
oma04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130249404 (SNX13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
DUF6395
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
130249404
NCBI-ProteinID:
XP_056340140
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Position
2:119546650..119611087
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AA seq
966 aa
AA seq
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MLRETSLSIWGWGSLVLFLATFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLEQC
EHSFLPCTSVGIPKCIEEMKRETRPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYT
LSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIAEK
GNQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGDFQ
NKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNIGE
LEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTVKL
AANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLQS
RQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPEIF
DDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPTGS
INLSLDDLSNVPSDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRNAN
SEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAYLQ
LLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSIP
DSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDDNI
PLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVA
DAVKRFRDAFWPNGILAEAVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRKGI
LRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFNKLHSRSKQMQRYKQRLHSTQA
PSLQKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttaagagagaccagtctttccatatggggatggggaagtcttgtgctttttctagca
acttttggacccttcgctatattttactttgcattttatatcctctgctttgtgggtggg
ggttttgtggttactcttttatttggaaaaagcaattcagaaaaatatcttgagcagtgt
gaacattcatttctcccttgtacatcggttgggatccctaagtgcatagaagaaatgaaa
cgtgaaaccagacctattaagattgatagaagactgacaggtgcaaacataattgatgag
cctttgcaacaggtaatccaattttccctgagagactatgtgcagtattggtattataca
ctaagtgatgatgaatcctttcttctggaaattaggcaggctcttcagtatgcacttgtt
cagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacgacttgtt
gatgattttggcactcatcttcgagttttcagaaaagctcagcaaaggatagcagagaaa
ggcaatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggttgaagtt
gaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaagaagga
ttcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagacttccag
aacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttcttccatta
ataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgattcgtgat
tccaactgtaactatgaggcctttatgaatattattaaattaagtgataatataggagag
ttggaagcagtgaaagataaagcaagtgaagaattgcaatatcttcgatctctagataca
gcaggagatgatatcaacactattaaaaatcaaataaacagtttattatatgttattaaa
gtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtgaaactg
gcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagacaatgtt
gcactacagttttttatggattacatgcagcaaactggtggccaagcacatctgtttttc
tggatgacagtggaaggatacagggttacagcacagcaacagctggaggtacttcaaagc
cggcagaaagatggaaaacatcagactaatcagaccaagggtctattaagagcagctgca
tttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatattgatgac
aatttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacctgaaatcttt
gatgacattcagagaaaggtgtatgagttgatgctgcgagatgagaggttctacccttca
ttcaagcagaatgtgttgtatgtgcgtatgttagctgagctggacatgctgaaggatccc
agtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctactggcagc
ataaatctgtccttagatgacctttcaaatgtcccttctgatgagacagttcagctccat
gcatacatctcagatactgtctatgctgactctgacccatatgctgtggcaggagtgtgt
aatgaccacggcaagacgtacgccctgtacgccatcaccgtccaccggcggaacgcaaac
agcgaggagatgtggaagacgtatcggcgctacagtgacttccatgacttccacatgagg
atcactgagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaaacattc
aacaatatggacagagagtttttggaaaagaggaagaaagatttaaatgcttatttgcag
ctcttgttaaatcctgaaatgatgaaagcttctccagctttagcccattatgtgtatgat
ttcctggagaataaagcctacagcaaagggaagggagattttgcacggaagatggacaca
tttgtaaatccactgcgtaactctatgagaaacgtatcaaatgcagtcaagtctatccct
gacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtcagagaga
ctgggacaagacataaagcaatcatttttcaaggtgccacctctgatgcagaaaacctat
tcagatcctgaccattgccgtgttgcagcaccaattgatgacaatgtggatgacaatatt
ccactgagagtaatgctcctactcatggatgaagtctttgatttaaaggagagaaatcag
tggttaagaagaaacataaaaaatctgcttcagcaacttattagagcaacatatggtgac
acaattaatagaaaaatagttgatcatgttgattggatgacatctcctgagcaagtagca
gatgcagtgaaacgcttcagagacgctttttggcccaatggcattttagcagaagcagtt
ccacgaagggacaaagctatcaggatgagaacaagagtggcagggaaaaccaaattgctg
gaggtaatgccagatgaactgaagcacatcataggcgctgagacgacacggaaaggcatt
cttcgggtcttcgaaatgttccagcatagtcagctgaataagagaatggtgtatgtgttt
ctggagagattcctagaaaccttatttccacaaaataagttccctgagctgttcaacaaa
ctgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctactcaagcg
ccttccttacagaaaaggtga
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