Oenanthe melanoleuca (Eastern black-eared wheatear): 130249655
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Entry
130249655 CDS
T09236
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130249655 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oma01007
]
130249655 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130249655 (GARS1)
03029 Mitochondrial biogenesis [BR:
oma03029
]
130249655 (GARS1)
Enzymes [BR:
oma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
130249655 (GARS1)
Amino acid related enzymes [BR:
oma01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130249655 (GARS1)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130249655 (GARS1)
Mitochondrial biogenesis [BR:
oma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130249655 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
130249655
NCBI-ProteinID:
XP_056340598
LinkDB
All DBs
Position
2:144488261..144512558
Genome browser
AA seq
712 aa
AA seq
DB search
MPLPRSVLPALLRRLARPLRSAAAPPAMDGPQAEALLAPLRNAVRQQGELVRKLKEEKAP
QVDIDRAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFSIYGGVSGL
YDFGPVGCALKNNIIQAWRHHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVK
NGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELADLFVNYNVKSPV
TGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIG
NSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLYSAKAQVSGQSA
HVMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENEMAHYACDCWDA
ESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKHLKEPRTVNIVQFEANKGAIGKA
YKKDAKVVMEYLSMCDECYISEMEQLLNEKGEFTVETEGKTFLLTKDMVTVKRFQKTLHV
EEIIPNVIEPSFGIGRIMYTVFEHTFRVREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEF
MPFVKELSEALTRTGISHKVDDAAGSIGRRYARTDEIGVAFGITIDFDTVNRSPHTATLR
ERDSMRQIRAEISELPAIIRDLANGFLTWADVEAKYPQFEGQETGKKDTIEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttccccgtagcgtcctgcccgccctgctgcgccgcctcgcccgcccgctccgc
tccgccgccgccccccccgccatggacggcccgcaggccgaggcgctgctggcgccgctc
cggaacgcggtgcggcagcagggagagctggtgaggaagctgaaggaagagaaggctccc
caggtggacatagacagagctgtagcagagctcaaagctcggaagagggtcctagaggca
aaggagctggccttacagcccaaagatgacatcgtggacagagctaagatggaagacact
ctcaagaggaggtttttctatgaccaagccttttctatttatggaggagtcagtggtctg
tatgactttgggcctgttgggtgtgctttgaagaacaacatcatccaagcatggagacat
cacttcattcaggaggagcaaatcctggagattgactgcaccatgctcacgcctgagcca
gttctaaagacttctggccatgtagacaagtttgctgacttcatggtgaaagatgtgaaa
aatggggagtgtttccgtgctgatcacctcttaaaagctcacctgcagaaactgatgtct
gacaagaagtgcacagcagagaaaaaggcagaaatggaaaatgttctaacacagttggac
aattacggccagcaagagcttgcagatctctttgtgaactacaatgtgaagtcccctgtc
actgggaatgacctgtcccctcctgtttctttcaatctgatgttcaagacctccattggg
cctggagggaacatgcctggctacctgaggccagaaactgcacagggaatattcctcaac
ttcaaacgtctgctggagtttaaccaaggcaaattgccttttgctgctgcccagattggg
aattccttcaggaatgaaatctcaccccgctccggccttatcagagtgagggaattcacc
atggcagaaatcgagcactttgtggaccccagtgagaagaaccaccccaagttccagaat
gtggcagatctcaacatcctcctgtactcggccaaggcccaggtcagcgggcagtctgca
cacgtcatgcggctgggggacgctgtccagcagggtgtgatcaataactcggttctgggt
tacttcatcggcagaatctacctcttcctcacaaaggtcggcgtgtccccggagaagctg
cgcttccggcagcacatggagaatgagatggctcattatgcctgtgactgctgggatgca
gagtccaaaacctcctatggttggattgagattgttggctgtgctgatcgctcctgctat
gacctttcctgccatgcccgtgccaccaaagttcctctcgtagctgagaagcatctcaaa
gaacctagaacagtcaacattgttcagtttgaggcaaataagggagccattggcaaagct
tacaagaaggatgccaaggtggtgatggaatacctttccatgtgtgacgagtgctacatc
agcgagatggagcagctgctcaacgagaaaggggaattcactgttgaaactgaagggaaa
acttttctattaacaaaggacatggttactgtgaagagatttcagaaaacattacatgtg
gaagaaatcatcccaaatgtcattgagccctcgtttggcattgggaggatcatgtacaca
gtgtttgagcacacattccgcgtccgggaaggagacgagcagaggacgtacttcagcttc
ccagctgttgtggcaccgttcaagtgctctgttcttcctctgagccagaatcaggaattc
atgccttttgtcaaggaattatccgaggcactgaccaggaccggcatctcgcacaaggtg
gacgacgccgcgggctccatcggccggcgctacgcgcgcaccgacgagatcggcgtggcc
ttcggcatcaccatcgacttcgacacggtgaaccgcagcccgcacacggccacgctgcgc
gagcgcgactccatgcgccagatccgcgccgagatctctgaacttcctgccatcatccga
gacctggccaacggttttctcacctgggctgatgttgaggcaaagtatccacaatttgag
ggacaagagactggcaaaaaggacacaatagaggaataa
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