Oenanthe melanoleuca (Eastern black-eared wheatear): 130249718
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Entry
130249718 CDS
T09236
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130249718 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130249718 (RAD54B)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130249718 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130249718
NCBI-ProteinID:
XP_056340728
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All DBs
Position
2:23527833..23590912
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AA seq
929 aa
AA seq
DB search
MRRSAAPSQVQGNAGKKPRFIPPGKCLSVCLKNETKEMDQEIKLKEVDEKEGGASLLSKI
NVQNQNKNITQSVESTGKVKTKACFSIDKCIKAEMKMLNVPKADALYLPTSGTAKEEAAQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGPHDTDATALSQTNTKPFCKPFKN
VCQPSTKENMLKDSQSCKPRHDPNTPNSLVMPRPNASHQWMFNKAGLPVVDVVVDPYIAN
NLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFIASPLYSVMIISYEMLL
RSLDQIQAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSAAEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLSSRVIASCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSCDPVSEEYDESSLYEGVIDVFPQDYTSDTFSETHSGKLQVLVKLLAAI
HELNSSERVVLVSNYTQTLNVLQGVCKHYGYSYTRLDGQTPVSQRQHIVDTFNNKFSPAF
IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHAVHIYRLLTTGSI
EEKIYQRQISKQDLSGAVVDLSKTSEHTHFSVEELKNLFTLHEDSSCVTHDLLECDCMGK
IDHQNTSSEKPPISRSCQIEQNHGKPNSKKPLSMSQLMQWKHFSVQHQTLADPFLERIKE
NVSFIFQNVTTPTSPPNKTGMSFSSSSLS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctccaagtcaagtccaaggaaatgcaggcaaaaagccaaggttt
ataccaccaggaaaatgtctttctgtttgtctcaagaatgaaactaaggagatggaccaa
gaaattaagttaaaggaggtagatgagaaagagggaggtgcttcactgctgtctaaaata
aatgtccagaatcaaaacaaaaatattacacagtctgtggagtcaactggaaaagtaaag
acaaaagcatgtttcagcattgacaagtgtatcaaggcagaaatgaaaatgctaaatgtg
cccaaagctgatgcactgtatttgccaacatcagggactgcaaaggaagaagcagctcag
gaagcacctgactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagctagac
agtcttgatgaaggtcaaacactgatggttggcggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggcctcatgac
acagatgcaactgcattatctcaaactaatacaaaaccattctgtaaaccattcaaaaac
gtctgtcaacccagtactaaagaaaatatgctcaaagattctcaaagctgcaaacctcgc
catgatccaaacactccaaattctctagttatgccaagaccaaatgcaagtcatcagtgg
atgttcaataaggctggtttacctgtggtggatgtagttgtagatccctacattgcaaat
aatctccgcccacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatg
agagttagtggcagatttggagctattcttgctgatgagatgggcttaggaaaaaccctg
cagtgcattgcacttgtctggactcttctgcgtcaagggccctatggatgcaaacctgta
ctgaagagagcactggtagtcacccctgggagtctggtgaaaaactggaaaaaagagttt
cagaaatggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaagta
gaagaattcattgcttctccactttattcagttatgataatcagttacgagatgctgttg
cgatctttggatcagattcaggctgtagaatttaatctcctaatctgtgatgaaggacat
cgtctgaaaaatagcactattaagacaactacagcccttactagtctgtcttgtgagaga
agaattatccttactggtacgcccatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatactcggttctttatccacgtatagaaagatatatgaggaa
ccaattgtcagatccagagaaccttcagcagcagaggaggaaaaggaattaggagaaaaa
agagcagcagaactcacacgcctcactggcctctttattctaagaagaacacaggaggtt
ataaataaatttctgccccccaaaaaggagagcatcatcttctgccgaccaacagcgctg
caacttgaattgtaccgaaaactgcttagttctcgtgttattgcatcctgtctacaaggc
aggctggaaaatagtccacacctaatatgtataggagctttgaaaaaactttgcaatcat
ccatgtcttctgtttaaagctataaaggaaaaaagctgtgatcctgtgtctgaggaatat
gatgagtccagcctctatgaaggtgtaatagatgtcttcccacaggattatacttcagac
actttctctgaaacccattcaggaaaattgcaggtgctggtgaagttgttagcagcaatc
catgagcttaactcttctgaaagagtcgtgttggtgtccaattacactcagacattaaac
gtgttacaaggtgtatgcaaacattatggatactcctataccagacttgatggacagact
cctgtctcccagagacaacatattgttgatactttcaataataaattcagcccagctttt
atctttttgctgagttcaaaggctggtggagtgggactgaacctggttggagcatctcat
ttgatcctgtatgatattgactggaatccagctacagatattcaggcaatggctagagtg
tggagagatggtcagaaacatgctgtccatatctacaggctgctaaccacaggctcaata
gaagaaaagatttatcaaagacagatcagcaaacaagacctttctggggcagttgtagac
ctttccaagacatctgaacacacacatttttctgttgaggagcttaaaaatctctttact
ctacatgaagattccagctgtgttactcatgacttgctagagtgtgactgtatgggaaag
attgaccatcaaaatacttcctcagaaaagcctcccatatctagaagctgccagattgaa
caaaaccatgggaagcctaattcaaagaagccactttccatgtcacagttgatgcaatgg
aagcatttctctgtgcaacatcagactcttgctgatcctttccttgaaaggataaaagag
aatgtttctttcattttccagaatgtaaccactcctacttccccacctaataaaactgga
atgtctttttcttcatcttccttgtcatag
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