KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130249853
Entry
130249853         CDS       T09236                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    130249853 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oma03400]
    130249853 (WDR48)
DNA repair and recombination proteins [BR:oma03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     130249853 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Nucleoporin_N RAWUL WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 130249853
NCBI-ProteinID: XP_056340961
LinkDB
Position
2:143566541..143591898
AA seq 700 aa
MQDGGASPAEHGGAAESAEVPVASSRQHLLKETRGTGSQVSYVIRDEVEKYNRNGVNALQ
LDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDT
TVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNN
TVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALL
LNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIY
CTDLRNPDIRVLICEEKAPVLKMELDRSADPPPALWVATTKSSVNKWTLKGIHNFRASGD
YDNDCTNPIPPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVED
LGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSD
PKLNLGGLLLQALLEYWPRTHINPMDEEENEINHVNGEQENRVQKGNGYFQVPPHTPVIF
GEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGA
KTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEE
KIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgcaagatggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcagaagta
cccgttgccagctccaggcagcatttgttgaaagaaacccgtggcacaggcagtcaggtt
tcctatgtgattagagatgaggtggagaagtacaaccggaatggggtaaacgcacttcag
ctggacccagcattaaacagactcttcacggcagggcgggactccatcataaggatatgg
agtgtcaatcagcacaagcaagacccttatatagcatctatggaacaccacacagattgg
gtaaatgacattgtgctctgctgcaatggcaaaacattgatatctgcttcttcagatact
actgttaaagtgtggaatgcacataagggattttgcatgtcaacactaaggacgcataag
gactatgtgaaagccttagcatatgcaaaagataaggagctggtagcatctgctgggctg
gacagacagatattcctctgggatgtaaatactctcacagcactgactgcctcaaataat
actgtcacaacttcttccctgagtgggaacaaagactcaatctacagccttgcaatgaat
caaatgggaacagttattgtatcagggtccactgaaaaggttctaagggtgtgggatcca
aggacttgtgcaaaactaatgaaactcaaagggcacacagacaatgtcaaagctttgttg
ttgaacagagatggtacccagtgtctttcaggcagctctgacgggacgatccgcctgtgg
tcccttgggcagcagaggtgcattgccacgtaccgagtccatgatgagggtgtttgggct
ctgcaggtcaatgaagccttcactcatgtttattcaggaggaagagacaggaagatttat
tgtacagacttacgaaatcctgatatccgggtgctgatctgtgaagaaaaggcaccagtt
cttaagatggaactggatagatcagctgatcctcctccagcactttgggttgcaacaact
aaatcctctgtgaataaatggactttgaagggaatccataattttagagcatcaggagat
tatgataatgattgtaccaatcctattccacccctgtgtacacagcctgaccaagttata
aaagggggtgctagtattattcagtgccacattcttaatgacaagaggcacatattaacc
aaagacacaaataataatgtggcatactgggatgtcttgaaggcatgtaaagttgaagac
cttgggaaagtagattttgaagaagaaattaagaagagatttaaaatggtttacgtgcca
aactggttctcagtggacttgaaaactgggatgttgacaattactttggatgaaagtgac
tgctttgcagcctgggtttcagcaaaagatgctggatttagcagtcccgatggttctgat
ccaaagttaaaccttggagggcttctgctgcaagcacttctggagtattggcctagaaca
catatcaatccaatggatgaagaagaaaatgagataaaccatgtgaatggggaacaagag
aacagagtccagaaaggaaatggatacttccaagtgccaccacatacaccagttattttt
ggtgaggctggaggacgcactttgttcaggttgttatgtcgggattcaggaggtgaaact
gaatccatgcttcttaatgaaacagtgccacaatgggtaattgacatcactgtggataaa
aatatgcccaagttcaataagattcccttctacctccaaccacattcatcatcaggggca
aaaactctaaaaaaagaccgactgtcagccagtgacatgcttcaggtgagaaaagtgatg
gaacacgtgtatgagaaaatcatcaacttggataatgagtctcagacaacgagctcctcc
aacaatgagaaagcaggagaacaagaaaaggaggaggacattgctgtgctagctgaggag
aagattgaacttctgtgccaggaccaggttttggaccccaacatggaccttcggactgta
aaacacttcatctggaagagtggcggggacctgacgcttcactaccgccagaaatccacg
tga

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