Oenanthe melanoleuca (Eastern black-eared wheatear): 130250512
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Entry
130250512 CDS
T09236
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03013
Nucleocytoplasmic transport
oma05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130250512 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130250512 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130250512 (NUP98)
03036 Chromosome and associated proteins [BR:
oma03036
]
130250512 (NUP98)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130250512 (NUP98)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130250512 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ZapB
Motif
Other DBs
NCBI-GeneID:
130250512
NCBI-ProteinID:
XP_056342209
LinkDB
All DBs
Position
1:111584295..111630682
Genome browser
AA seq
1790 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGASSGGAFGTSAFGSTSSTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTSGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSTLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQEGEREEEEEPQEVTRFYTNPIARPVPQSPE
GPRGDDTIAVLNMRNGLEGSSEDASCQEDSLHEDWDREAEPGQQLHPAGIVLTRAGYYTI
PSLEELARLTNDRKECIVTDFTIGRRGYGSIYFEGEVNLTNLNLDEIVHIRRKEVIVYPD
DERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEAVSRRQGARFK
EYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPSKVDTKKLKTTPVPPPGHLPPQQMALNG
KPAPPAQPLELEQLGRVVELDSDMADITQEAAQEPLAEDSLAEEQEAVPASTHIASRQGI
NPYVLQIMKASLLADDDDDLDLILDYPGKHPVKMDTSQEICSPRLPIAKSQGQKRHSAAG
LLQPKFASVLVAAPGAAVAAPGAAVAAPGAAVAAPGAAVAAPRALGSPPRGALWSAPEAQ
VRPVGARRQRGLVPLQRSITYGKGKLLMDMGLFMGRAFRVGWGPNWTLVNSGDQLSAPRE
VEDAQLEPVEYGFLPTPAAPKSLTESPFKVHVEKLSLEQWKLDRDKELYLTPLEIKLKHS
TVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTLAETVVKHWCLAWTLCEAVWGRLQE
PGPGPEERGEYALALERRRAFSRWLSDTAAARIEREVALARHGSHVEAVFSCLTGRRIGE
ACRLAQRAGDHRLALLLSQLAGSQPVRELLTLQLVDWHRLHSDRFMQEERLRLFALLAGK
PVWQLSERISVNVCSLLDWKRCVAVHLWYLLPPTASIPRALAMYEAAFQNTSECEKYACC
PLPPYLEDSGCAIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFRLS
WHLWEVLRALNYCHLSQQSWGVLNSSYAAQLESEGLWEWAVFVMLHEPDAHTREQAVRAL
LGRHCALADSPDSWAKENFLTQRLCVPPRWIHEAKAVRARMEGDKHREALFLFKAGHWNQ
CHKLVVRHLASDAIINENYKYLKGFLEELAPPERSALIQDWELAGLVYLDYIRVNEMLDR
IQQLDVSTYELERLHTKVTSLCNRIEQLRCHNAKDRLAQSDMAKRVANVLRAVLSLQQGP
EAGPEAAEARVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccgttcggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttggcgcgagcagcggaggagccttcgggacgtcggcc
ttcggctccaccagcagcacgggcagcctcttcgggagcacgcagaccaagccaggagga
ttgtttggctcaaccaccttcaaccaaccggccacctcctccaccagcactggctttggg
tttggaacatccactggcacatccaacagcctctttggaaccaccagcactggtgggagc
ctcttctcatcccagaacaatgcctttgcacagaacaagccagctggctttggaaacttt
ggtacaagcactagcagtggggggctctttggaaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagcttcactgctgctccaactggcaca
actattaaatttaatccccccaccggcacggacaccatggtgaagtcgggcgtgagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggcaaacaggaaagggcccacgaatcctgtggga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacagccacagga
ctttttggctcttccactaccaatacaggcttttcctatggacagaataaaactgctttt
ggaaccagtaccaccggctttggcacgggcaccagcggggggctcttcgggcagcagcca
cagaccaccagcctgttcaacaagcccttcggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctcacagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggcctgttcggttttggtgccaacactgctgga
aatagtttgtttggaaacaagcctgcaactgggactctgggcactggacttggaacaggg
tttggaacagctctgggggcaggacagacgtccctgtttgggaacacccagcccaagctg
gggggcacgctggggacgggagcgttcggagcgccggggttcaacacctccactgccacc
ctgggctttggggcccctcagcctgctgtagctctgacagaccccaatgcctctgcagcc
cagcaggctgtcctccagcagcacctcaacagcctgacctactcaccctttggggactcc
ccactcttcagaaaccccatgtcagaccccaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggccttgaccacccccacccactacaagctgaccccccggccg
gccacccgcgtgcggcccaaggcgctgcagtcggccggctcggccaagtcccagctcttc
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctgagcagcagcaccctgttctcccccgtgagccga
gagaacgaggacctggcgtcaccgtcggagtacccggagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccaccggcaggagggggagcgggaggaggaggaggagccg
caggaggtgacgcggttctacaccaaccccatcgcgcggccggtgccgcagagccccgag
gggccgcgcggggacgacaccatcgcggtgctcaacatgcgcaacgggctggagggcagc
agcgaggacgcctcctgccaggaggactccctgcacgaggactgggacagggaggctgag
cccgggcagcagctgcaccctgcagggattgttctgactcgagctggctactacaccatc
ccgtccctggaggagctggcccggctgaccaacgacaggaaagaatgtatcgtgacagac
ttcaccatcggccgccggggttatggatcaatttacttcgaaggagaagtaaatctaacc
aacttaaacctggatgagatcgtacatatccggagaaaagaagttattgtgtaccctgac
gacgagagaaaacctcccattggggaagggttaaacaggcgtgccgaggtgaccctggac
ggggtgtggcccacggacaagacgtcgcggtgcctgatcaagagccccgagcggctggcg
gagatgaactacgaggggcggctggaggccgtgtcccgccggcagggggcgcgcttcaag
gagtaccggcccgagaccggctcctgggtcttcaaggtagcacacttttccaagtatggc
ttgcaagattcagatgaggaagaggaagatcatccttcaaaagtggacaccaagaagtta
aagaccacacctgtgccacccccagggcacctgccaccccagcagatggctctgaacggc
aaaccagcacccccagctcagcccctggagctggagcagctgggcagggtggtggagctg
gacagtgacatggcagacatcacccaggaggcagcccaggagcccctggcagaggacagc
ctggccgaggagcaggaggcagtgccagcgtccacacacatcgcatcccgccagggcatc
aacccctacgtgctgcagatcatgaaagcttccttgcttgctgatgatgatgacgacctg
gatttgatcctggattatcctgggaagcatcctgtcaagatggacacttcccaagagatc
tgctccccaaggcttcccattgcaaaatcacagggacagaaaagacattcagctgccggg
ctgctgcagcccaagtttgccagtgtgctcgtggcggcccccggtgcagctgtggcagcc
cccggtgcagctgtggcagcccccggtgcagctgtggcggcccccggtgcagctgtggca
gccccccgggccctgggcagccccccccggggcgccctgtggtcggcgcccgaggcgcag
gtgaggccggtgggcgcgcgccggcagcgcgggctggtgcccctgcagagatccatcacc
tacggcaagggcaagctgctgatggacatggggctcttcatgggccgcgccttccgcgtg
ggctggggccccaactggaccctggtgaactccggggaccagctcagcgcccccagggag
gtggaagatgctcagctggagcccgtggaatacggattcctgccgactcctgctgctccc
aaatcactcacagaatcccccttcaaagttcacgtggaaaagttgagtttggagcaatgg
aagctggacagagacaaggagctgtatctcacccctctggagatcaagctgaagcacagc
actgtccatatggatgagccctgtcctctcctggcccccaaccctggggtctctgctatc
catgactatgctgactgggccaggaaagcatctgaggatcccactctggcagagaccgtg
gtgaagcactggtgcctggcctggacgctgtgcgaggccgtgtggggccggctgcaggag
ccggggcccggccccgaggagcgcggcgagtacgcgctggcgctggagcggcgccgcgcc
ttctcgcgctggctgtcggacacggcggccgcgcgcatcgagcgggaggtggcgctggcg
cggcacggcagccacgtggaggccgtgttcagctgcctgaccggcaggaggatcggcgag
gcgtgccggctggcgcagcgggcaggtgaccaccgcctggcgctgctgctgtcgcagctg
gcgggcagccagcccgtgcgggagctgctgacgctgcagctcgtggactggcaccgcctg
cacagcgaccgcttcatgcaggaggagcggctgcggctcttcgcgctgctggccggcaag
ccggtgtggcagctctcagagaggatcagtgtcaacgtgtgctcgctgctggactggaag
cgctgcgtggccgtgcacctgtggtacctgctgccccccacggcctccatccccagggcc
ctggccatgtacgaggcagccttccagaacacctcagagtgtgaaaaatacgcctgctgt
cctctgcctccctacctggaagattctgggtgtgccattgaagaagatgacaatggagga
aggcccctgagagatgtctgcttccacttgttaaagctctatagtgacaggtcctatgag
ctggaccagctgctggaccccaggagtgtgacctctgacccgctggatttccgcctcagc
tggcacctgtgggaggtgctgcgggccctgaactactgccacctgtcccagcagagctgg
ggggtgctcaactccagctatgctgcccagctggagagtgaggggctctgggagtgggct
gtgttcgtcatgctgcacgagcctgatgcacatacccgggagcaggccgtgcgggcgctg
ctgggccggcactgtgccctggctgacagccccgactcctgggccaaggagaacttcctg
acccagcgcctctgcgtgcccccgcgctggatccacgaggccaaggccgtgcgggccagg
atggagggggacaagcacagagaggcccttttcctcttcaaggctggccactggaaccag
tgccacaagctggttgtcaggcacttggcctcagatgccattatcaacgagaactacaag
tacctgaagggattcctggaagagctggcgccccccgagcgcagcgcgctgatccaggac
tgggagctggcagggctggtctacctcgactacatccgtgtgaatgagatgctggacagg
attcagcagctggatgtttccacctacgagctggagcggttacacaccaaagtgacgtcc
ctgtgcaacaggatagagcagctgcggtgccacaacgccaaggaccgcctggctcagtca
gacatggccaagcgcgtggccaacgtgctgcgggcggtactgagcctgcagcagggcccc
gaggcgggccccgaggcggccgaggcgcgcgtgcccctgcgcctgctggccccgcacatc
ggccgcctgcccatgcccgaggactacgcgctggaggagctgcgcggcctcacccaggcc
tacctgcgcgagctggcgctggccgcgcactga
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