Oenanthe melanoleuca (Eastern black-eared wheatear): 130250672
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Entry
130250672 CDS
T09236
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04517
IgSF CAM signaling
oma04520
Adherens junction
oma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130250672 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130250672 (AFDN)
04530 Tight junction
130250672 (AFDN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
130250672
NCBI-ProteinID:
XP_056342537
LinkDB
All DBs
Position
3:complement(70751880..70864001)
Genome browser
AA seq
1912 aa
AA seq
DB search
MSGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFATK
CIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNW
NKDDREGRFVLKNENDTVPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEAL
RQASDKDDRLLHGDDIENFRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEF
RSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCI
ACVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKTRK
IADGKQLKGKERIDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPK
LYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRI
SETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRSTDASLMVKGPRHKAGAVQETTFDLE
GDIHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIDQQDYRRQDSRSQDTHGPE
LILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPAE
RTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIIRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPDE
PLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPSG
LQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNTYAS
GTTTKITSVSTGNLCTEEQILPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQGQWPN
YEEKPQLQAESNHSINTTMQRVARSQEELRDKAFQPERNRLEVVIRKDVEYIDRKSDSDQ
WMNSSVDSSTSSQEHLNHSSKPVSPGSGLTKSGPGRWKTPATSQPTPVAISQPIRTDLPP
PPPPPPVHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEHQRWYEKEKAR
LEEERERKRREQERKLGQMRSQPLIPAQPVVPPVPLQQVKSEKPSTLQRPQETVIRELQP
QQQPRTIERRDLQYITISKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQEL
QNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDEVDTMLIMQRLEAERRA
RLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRRQEEEYYSRLEAE
RRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRNTSYLKTQVLSPD
TIYTAKFVAYNDDDEEEEDSNLAGQDKYSSTRKSYGDFPPATLKPQQPSRQPRPVSDGIF
LSNSFQSSPVNANSTTVKKSQPPPPSNKPSFIHASSSKGINSYTGSTGAAAGEVYRDPRD
KRSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcggcagccgggaggaggagcggcgcaaactcgccgacatcatcaac
cactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatctcgag
tttcatggagtaatgagattctattttcaagacaaagcagctggaaattttgcaacaaaa
tgtatccgtgtctctagtactgccacaactcaagatgtgatagaaactcttgcagagaag
tttcgaccagacatgcgaatgttgtcatcccctaaatactcactttatgaagttcatgtt
agtggagaagaaagaagattagatgtggatgagaagcctcttgttgtacagttaaactgg
aacaaagatgatcgcgagggaaggtttgtcctcaagaatgaaaatgatacagttcctcca
aagaaagctcagagtaatgggcctgaaaaacaagaaaaagagggagtaattcagaatttc
aagcgaactctctcaaaaaaagaaaaaaaagaaaaaaagaggcgtgaaaaagaggcattg
cgacaagcgtcagataaagatgataggcttcttcatggggatgacattgagaattttcgc
cttgcagccgaggtttacaaagatatgcctgagaccagcttcactcgcacaatatccaat
cctgaggtggttatgaaacggcggcggcagcaaaaactagagaagagaatgcaggaattt
cgcagttctgatggcagaccagactcaggtggaacgctgagaatttatgcagacagttta
aaaccaaacataccgtacaagacaatcctgctgtccactacagatactgcagactttgca
gttattgaagcactggaaaaatatggcctggaaaaagaaaatcccaaggattattgtatt
gcttgtgtcatgttgcctcctggtgctcagcactctgatgataaaggtgctaaagaaact
attcttgatgatgatgagtgtccactgcagatattcagggagtggcctagtgataaagga
atactggtctttcagttgaaaagacggcctcctgattatgtccccaagaagaccaggaag
atagctgatggaaagcaattaaaggggaaggaaagaattgatggttctggctatggctct
tgccttcctcctgagaaactaccatacttggtagaattaagcccagggagaaggaatcac
tttgcctactacaactatcacacttacgaagatggctctgactccagggacaagccaaag
ctctatcgtctacaattaagtgtcactgaagttggaactgaaaaatttgatgacaattcc
attcagttatttggtccaggaattcagcctcaccactgtgacctcactaatatggatgga
gttgttactgtaaccccgagaagcattgatgctgaaacctacgtggaaggtcagcgtatt
tcagaaaccaccatgctgcaaagtggaatgaaggttcagtttgggtcttctcatgtattt
aagtttgtggatcctactcaggaccatattatttccaaaagatctactgatgcaagtctt
atggtcaaaggtccaagacacaaagctggagctgtccaggaaaccacatttgatctggag
ggagatattcacagtggaacagcattaccagcaagcaagagcaccagcaggctggatggt
gacaggacatcatctgcatccagcacagccgagcgaggaatggtgaagccaatgatcaga
atagaccagcaggattaccgcagacaggacagcagatctcaggatacccatggaccagaa
ctgatactgcctgccagtattgaattcagggaaagctctgaagatgccttcttatctgcc
attataaattatacaaatagctcaacagttcattttaagctgtcaccaacatatgtttta
tatatgacatgtcggtatgtattgtccagccaatacagacctgacatcactcctgctgag
cgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtaata
caggaggtagaccaggttgatcagaaacagaagaatattgctggggcccttgccttttgg
atggcaaatgcatctgaactactcaatttcataaagcaagacagagatcttagtcgaatt
actgtggatgcacaagatgttttggcacacttggttcaaatggcattcaagtacctggtt
cattgtctgcagtcagagcttaataactacatgccagcattcctagatgatccagaagaa
aataatcctcagaggcctaaaatagatgatgtgctgcataccttgactggagccatgtcc
ctgttgcgacgatgtagagtgaatgctgctctgacaatacagctcttctcccagctgttt
cattttatcaacatgtggctttttaacagattagttacagccccagattcagggttatgt
tcacattactggggagctatcattcgccagcaactcggccacattgaagcctgggcagaa
aaacaaggtttagaattggctgctgattgccacctgagcagaatagtacaggcaaccaca
ttgcttaccatggacaaatactcacatgcagatgttccaaatattaacagtacttgcttt
aagctaaattctctgcagctacaagctttgttgcagaattatcactgtgctccagatgaa
cctcttatcccaacagaattgatagagaatgtagtaactgttgcagaaaatacggctgat
gaacttgctcgcagcgatggccgagaagtccagctggaagaggatcctgacttacagcta
ccttttcttttaccagaagatggctattcctgtgatgttgtcagaaatgttccaagtggt
ttacaagaatttttggatccactttgtcaaagaggtttttgtagactaacacctcatcca
cggtcaccaggaacgtggacaatatactttgaaggtgcagattatgaaagtcacctgtcc
catgagaatgctgagctggctcagcctttgagaaaagaacctgaaattatcactgtaaca
ctaaaaaaacaaaatggaatgggactgagcatcgttgctgccaagggtgctggtcaagac
aaacttggaatatatgtcaagtctgtagtgaaaggaggtgctgcagatgtggatggtcgt
ctggccgcaggggatcagttgcttagtgtggatggtcgaagtttggtgggcctatcccag
gagagggcagcagaactaatgaccaggacaggttctgtagtaacactagaagtagcaaaa
caaggagcaatttaccatggtctggcaaccctgcttaatcagccatccccaatgatgcaa
agagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggctttgagctg
tataacaactccacgcaaaacggatcacctgagagtcctcagctgccatggacggagtac
agcgaaccaaagaagctgccaggggatgacagactgatgaagaacagagccgatcatcgt
tccagtcccaatgtagcaaatcagcctccaagccctgggggaaaaaatacttacgcatct
ggaactaccaccaaaataacctcagtctctactggaaatctttgtacagaggagcagatt
ctgccgccacgacctgaagcttatcccatcccaacacagacctatactagagaatatttc
acattcccagcttcaaagtcccaggatcgaatgggtccagctcagggtcagtggccaaat
tatgaagaaaaaccacagctccaggcagaaagtaatcattctatcaatactaccatgcag
cgtgtagctcgttcccaggaagagctcagagacaaagctttccagccagagcggaatcgc
ttggaagttgttatacggaaagatgtggagtacattgatcggaagtcggacagcgatcag
tggatgaattcttctgtggattctagcacatctagccaggagcacctgaaccattcctcc
aaaccagtgtcgcctggttctggtttaactaaaagtggacctggccgttggaaaactcca
gccactagccagccaactccagtggccatttcccagcccatcagaacagatcttccccct
ccaccaccacctcctccagtgcattatgctgccgaatttgacgaactacaaatggatttg
cctctgcctccccctcctcctccaaatcagataggagcacaagcatcctcccaggtagct
gctgctgagcgtaaaaaaagagaagagcatcagaggtggtatgaaaaggaaaaggcacgt
ttggaagaagaacgagaaaggaaacgtcgtgagcaggagagaaaactgggccaaatgcgt
tcacagccactaattcctgctcagcctgtggttcctcctgtcccccttcagcaagtgaaa
tcagaaaaaccctcaactttgcagaggcctcaagaaacagttattcgagagctgcagccc
caacagcagccacggactattgagcgaagagatctgcaatacattactatcagcaaggaa
gagctgtcctctggtgatagcctgtctccagatccatggaaacgggatgcgaaggagaaa
ctggagaagcagcaacagatgcacattgtggacatgctgagtaaagagattcaggaactt
cagaacaagcctgatcgtacagcagaagaaaacgaccgcctccgcaaactcatgctcgag
tggcagttccaaaagcgactgcaagaatcaaagcaaaaggatgaagatgatgatgaagag
gaggatgatgaggtggatactatgctcatcatgcagcgactggaggcagaaagaagagca
aggttacaggatgaagaacgcagacggcagcaacagttggaagaaatgcggaaacgagaa
gcagaagacagggccaggcaggaagaggagcgccgacagcaagaggaggagcggaccagg
agagaggctgaagaaaagaggcgccaggaagaggagtattacagtcgcttagaggctgaa
aggcgcaggcagcacgatgaagctgaacgaagattgctggaacctgacgagcctggtctg
tacagacctccacttccacgggaatatgaactcccatccccaaccccttcatctaacgct
cctcctcccccacctcagcgaaacacctcttacctcaaaacacaggtcctctcccctgac
acgatttatactgccaagtttgttgcatacaatgatgatgatgaggaggaggaggattcc
aatctagcaggtcaggataagtactccagcacaagaaaatcttatggtgactttcctcct
gccacccttaaaccacagcagccctcccgccagcctcgcccagtttcagatggcatcttt
ctttccaactcattccagtcatctcctgtcaatgccaacagtactactgtcaaaaaaagc
cagcccccgcccccatcaaacaaaccaagtttcatccatgccagcagctctaaaggaata
aattcatacactggatctacaggagcagctgctggggaagtttatcgggatccaagagac
aaaagatctaaaagtcaagatgcagatttacctggagcaccagaaaacttgacgttcagg
gaacgccagcgacttttttcacagggtcaggatgtatctaataaagtaaaagcttctagg
aaactaatggaactggaaaatgagctgaacacaaaataa
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