Oenanthe melanoleuca (Eastern black-eared wheatear): 130250697
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Entry
130250697 CDS
T09236
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130250697 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130250697 (HBS1L)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130250697 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
130250697
NCBI-ProteinID:
XP_056342583
LinkDB
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Position
3:complement(53922402..53980276)
Genome browser
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYG
CEGTDSAADCFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDTEFDVQKAL
DLVLSQGSKQNMKTKNKDAVIIAKTTKGKTRDSQSARMESEIVPKITKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLPEDATVASGVLEAVSKSTLSPQVVQVSEEQNMVPTPAKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGNCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacaggaacgtccgaggatataactacgatgaagactttgaagatgatgat
gtgtatggccagtcggtagaagatgattattgcatttctccttcaacagcagcccaattt
atttactccagacgagacaaaccagccacttttgctgagccattagaagaagaatatggc
tgtgaaggtaccgattctgctgctgattgttttacacccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaagcaatggtgcaagcagtactggatactgaatttgatgtacaaaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatatgaagaccaagaataaggatgctgtg
attatagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcgattgctgaggaaaatggccacactaatacacctcagaaaggactg
ttacctgaagatgccactgtagcttctggggtacttgaggctgtctcaaaatctactctt
tcaccccaagtggtgcaggtttcagaagagcagaatatggtgcctactccagcaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagtactttaatg
ggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaattcgagacaccaact
aaagtaattacactgatggatgctccgggccacaaagacttcattccaaatatgatcaca
ggagctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagagtttgag
gcaggatttgagactggtggacaaactcgagagcatggattattagtacgctctcttgga
gtgacacagttggctgttgcagtcaacaaaatggatcaggtcaattggcagcaggaacga
tttcaggaaattacaagtaagcttggccaatttctcaagcaagctggctttaaggaatca
gatgtggcttatatcccaacaagtggccttggtggtgaaaatctagtcacgaggggtcag
tcaagtgacctcacacaatggtataagggaaactgtttgttagagcaaattgattctttc
aagccaccgcagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggttgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgagccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaacccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagactattg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttggctaaa
ggccagaatgctctaatagaactacaaactcaaagacctgttgctctagagttgtacaaa
gattttaaagagctggggaggtttatgttacgctacagtggctccactattgctgcagga
gttgttacagagattaaagaatga
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