Oenanthe melanoleuca (Eastern black-eared wheatear): 130250698
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Entry
130250698 CDS
T09236
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130250698 (PRDM1)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130250698 (PRDM1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
130250698
NCBI-ProteinID:
XP_056342587
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All DBs
Position
3:41635160..41735907
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AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQSATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYSSNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPPSRELTMMNLTQTHINPKQHSTDKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccagtctgctacacagtgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcacccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatattcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatacggttcccaagaatgcaaacagaaaatacttttggcggatctattcaagtggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgcaaaccaagagctgcttgtgtggtactgccgagac
tttgcagagaggctgcattatcccccctccagagagctgacaatgatgaacctcacacaa
acccacattaatccaaagcagcacagcactgataaagatgagctttatcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctcctaaagga
aaagacttctttcagaccaacatttcaccagttactccagaaaaagacttggatgattta
cgtaagaactacagcccggagaggtgtttcttccctcgagttgtctacccaatccgacct
cacattccagaagactatctgaaagcttccttagcatatggcatggacagacccagctac
attactcactcgcccatccaggcatctactacaccaagtccttctgggaggagcagccca
gaccaaagtttaaaaagttcaagcccacacagtagtccaggggtcacagtttcgcccctg
gcacctacttcccaagagcacagagagccatactcttacttgaacgggtcgtatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttctg
ccgtcctataacccccattaccccaaatttctgttacctccattcaacatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatg
taccctctttatggcaacctgctcagcggaggtagcctttcccaccacatgctcaacccc
accacgctccccagctcattgcccagcgaaggaggccgtcgactgctgcagcctgatcat
ccgagagacttcctcataccagcacccaacagtgccttctcgatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcccccaccgctggtacagcagcc
agttcagaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctcccg
tacccactgaaaaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagtggagagagaccattt
aaatgccagacttgcaataagggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaagccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgg
gaacgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaactgccccgtcgccccggcctccggcctctccatggaggacctg
aaccggatcaacgaggagatcgagaagttcgacatcagtgacaatgccgacaagctggaa
gaagtggaggacaatatcgacttgacatcgatcgtggagaaggatatactgaccatgctc
aggagggaaatggaaggagctaacctgaaagtctctctgcagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcgtcagatatgtcagttatgaagttgcct
catggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccaatg
gacccttaa
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